Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco1g00287 ATGCATAACCTCGCAGTTTATCTCAACATTTGTTTTGGTGCATTCAAAATGGCTGAGATTATGGTCATTTTTGACTTTGACTCAACAATCATTGAGTGTGATAGTGATAATTGGGTGCTTGATGACACTGCTTTAACTGAAAACTTCTACCAGCTTCTTCCTAGCACGGCTTGGAACCCTCTCATGGATAGGATGATGAAAGAGCTTCATTCACAAGGAAAAACCATTGAAGACATTGTGGAGATTCTGAAGAGGACACCAATGCATCCTTGCATTGTTCCTGCAATTGAGGCAGCTTATTCCCTTGGGTGTGATCTGAAGATTGTGAGTGATGCAAATATTTTCTTTATTGAGACAATTCTGAAGCATCATGGAGTGTGGAACTGTTTCTCAGAGATCATTTGTAACCCCAGCCATGTCAAGGAAGGGAGCCTCAACATTTGTCCATACCATGATTACCTAAAATCTTCCCATGGATGCAATCTTTGTCCACCAAACATGTGCAAGGGATTGGTGATAGAAAGGATTCAAAATTCCATGGCAGGAGCAGGAAAGAAGAAAGTAATTTATCTAGGAGATGGAAATGGAGATTTTTGCCCAAGTCTGAAGCTAAAAGAAAATGACTATTTGATGCCAAGAACAGGCTTTCCACTGTGTGATTTAGTTTCCAAAAATTCCAATAAGATAAAGGCAGAGGTGCATGGTTGGAGAGATGGGAAAGAGCTTCAACATGTTCTACTGCATCTCATCAACAAAGCTATTGAAGAAGGAAACAACATCATTAACAAAACTCCTCAAACAATCTCAGTTGATTGCAAGTTGGTGCCAACTCCAATTCCAATGGACACTCATCAACCTTTGCCAAAAGCTCTCTCAGTTCCTCAATAA 888 0.3998 MHNLAVYLNICFGAFKMAEIMVIFDFDSTIIECDSDNWVLDDTALTENFYQLLPSTAWNPLMDRMMKELHSQGKTIEDIVEILKRTPMHPCIVPAIEAAYSLGCDLKIVSDANIFFIETILKHHGVWNCFSEIICNPSHVKEGSLNICPYHDYLKSSHGCNLCPPNMCKGLVIERIQNSMAGAGKKKVIYLGDGNGDFCPSLKLKENDYLMPRTGFPLCDLVSKNSNKIKAEVHGWRDGKELQHVLLHLINKAIEEGNNIINKTPQTISVDCKLVPTPIPMDTHQPLPKALSVPQ 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco1g00287 295 Gene3D - 13 204 IPR023214 -
Phco1g00287 295 NCBIfam HAD-IB family phosphatase 22 202 - -
Phco1g00287 295 NCBIfam MtnX-like HAD-IB family phosphatase 20 213 IPR006384 GO:0016791
Phco1g00287 295 Pfam Putative Phosphatase 20 250 IPR016965 GO:0016791
Phco1g00287 295 PANTHER PHOSPHATASE, ORPHAN 1, 2 17 256 IPR016965 GO:0016791
Phco1g00287 295 SUPERFAMILY HAD-like 17 202 IPR036412 -
Phco1g00287 295 PIRSF PLP_phosphatas_PHOSPHO2 11 254 IPR016965 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco1g00287 Phco-Chr1 2082752 2084726 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00287 1 2082752 2084726 Phco10g01829 10 40577640 40579254 ECH
Phco4g03460 4 54816304 54818252 Phco1g00287 1 2082752 2084726 ECH
Phco1g00287 1 2082752 2084726 Phco1g00287 1 2082752 2084726 ECH
Phco1g00287 1 2082752 2084726 Phco10g01828 10 40571803 40573662 PCT