Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01829 ATGGCTGGAATTGTAGTGGTTTTTGACTTTGACAAGACCATTGTCGACTGTGACAGTGATAACTGGGTTGTTGATGAGTTGGGTTTCAATGTTTTGTTCAATCGTCTCCTTCCTACAATGCCTTGGAACACCCTCATGGATAGGATGATGATGGAGCTTCATTCCCATGGAAAAACCATTGATGACATTGTGCAAGTTCTTCAGAGGATTCCTATACACCCCAGAATAATCCCTGCCATTAAAGCAGTTCATTCTTTAGGGTGTGATTTGAGGATTGTAAGTGATGCAAACACCTTCTTCATCGAGACAATTTTAAAACACTTAAAAATAAGGGAATGCTTCTCAGATATCAACACTAATCCAAGTTATATTAATGAAGATGGAAGGCTACAAATTTTGCCTTACCATGACTTCAACAACTTTTCCCATGGATGCACTTTGTGCCCTCCCAACATGTGCAAGGGTGGAATCATAGAGAAAATCCAAGAGTCATTAGGAGAAAAGAAGAGATTGATCTATCTTGGGGATGGTAGTGGAGACTATTGCCCAAGCTTGAGGCTGAAAGAACAAGACTTTATGATGCCCAGAAAGAATTTCCCTGTGTGGGAATTGATATGCAGAGACCCTTTACTTATTAAAGCTCAAATTCATGAATGGAGCAATGGAGAAGAGCTTGAACGAATTTCGTTGCAGCTAATCAACAAAATTTCTTCGGGAGAAAGTTCTGAGTTCATTTCATCCAATTGCAACCTGCATATTATGTGTGTATTTGGTTCCGATTAA 783 0.3946 MAGIVVVFDFDKTIVDCDSDNWVVDELGFNVLFNRLLPTMPWNTLMDRMMMELHSHGKTIDDIVQVLQRIPIHPRIIPAIKAVHSLGCDLRIVSDANTFFIETILKHLKIRECFSDINTNPSYINEDGRLQILPYHDFNNFSHGCTLCPPNMCKGGIIEKIQESLGEKKRLIYLGDGSGDYCPSLRLKEQDFMMPRKNFPVWELICRDPLLIKAQIHEWSNGEELERISLQLINKISSGESSEFISSNCNLHIMCVFGSD 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01829 260 Gene3D - 2 187 IPR023214 -
Phco10g01829 260 NCBIfam HAD-IB family phosphatase 5 185 - -
Phco10g01829 260 PIRSF PLP_phosphatas_PHOSPHO2 1 237 IPR016965 GO:0016791
Phco10g01829 260 Pfam Putative Phosphatase 4 233 IPR016965 GO:0016791
Phco10g01829 260 SUPERFAMILY HAD-like 5 187 IPR036412 -
Phco10g01829 260 NCBIfam MtnX-like HAD-IB family phosphatase 4 197 IPR006384 GO:0016791
Phco10g01829 260 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 240 IPR016965 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01829 Phco-Chr10 40577640 40579254 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00287 1 2082752 2084726 Phco10g01829 10 40577640 40579254 ECH
Phco4g03460 4 54816304 54818252 Phco10g01829 10 40577640 40579254 ECH
Phco10g01829 10 40577640 40579254 Phco10g01829 10 40577640 40579254 ECH
Phco1g00285 1 2073832 2075115 Phco10g01829 10 40577640 40579254 PCT