Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01828 ATGGCTGGGATTGTGGTGGTTTTTGACTTCGACTCAACGATCATCGAGTGTGATAGTGACAACTGGGTTCTTGACGAGTTTGGTCTGACTGAAAAGTTCTATGATCTTCTTCCTAACACTCTTTGGAACCCTCTCATGGATAAGATGATGGATGAACTTCATTCACAAGGAAAAACAATTGAAGACATTGTACAAGTTCTGAACAGGACTCCAATGCATCCCTGCATTGTCCCAGCCATAGAAGCAGCATATTCCCTTGGGTGTGAGCTGAAGATTGTGAGCGATGCAAACACTTTCTTTATTGAAACAATTTTGAAGCATCATGGGGTTTGGAATTGTTTCTCTGACATCACTGCAAACCCCAGCTATGTTAATGAAGAAGGGAGGCTCAGAGTTTGCCCCTACCACGACTATGTCAAATCTTCTCATGAATGTAATCTCTGTCCACCAAACATGTGCAAGGGATTGGTGATAGAAAGGATCCAAAATTCGGTTGATGGTGCAGGAGAGAAGAAGTACATTTATCTTGGAGATGGAACTGGAGACTTCTGCCCTAGTTTGAAGCTGAAAGATAAGGACTATTTGATGCCTAGAAGGAATTTTCCATTGTGTGATTTAGTGTCAAAAAACTCTAATCACATAAAATCAGAGGTACATGCATGGAGAAATGGGGAAGAGCTTTATGATGTTATGCTCCATATTATCAACAAAATAATTGGTGAAGGAAAGAGCAGTGTTAGTAGTTCTACTCCAACAATATCAATTGATTGCAAGTTGGGGTCAATTTCAATTGATGTTCATAATAACCCTTTGCCTAAAGCACTTCCAGTTCCTCAATAA 840 0.4012 MAGIVVVFDFDSTIIECDSDNWVLDEFGLTEKFYDLLPNTLWNPLMDKMMDELHSQGKTIEDIVQVLNRTPMHPCIVPAIEAAYSLGCELKIVSDANTFFIETILKHHGVWNCFSDITANPSYVNEEGRLRVCPYHDYVKSSHECNLCPPNMCKGLVIERIQNSVDGAGEKKYIYLGDGTGDFCPSLKLKDKDYLMPRRNFPLCDLVSKNSNHIKSEVHAWRNGEELYDVMLHIINKIIGEGKSSVSSSTPTISIDCKLGSISIDVHNNPLPKALPVPQ 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01828 279 PANTHER PHOSPHATASE, ORPHAN 1, 2 1 240 IPR016965 GO:0016791
Phco10g01828 279 Pfam Putative Phosphatase 4 235 IPR016965 GO:0016791
Phco10g01828 279 NCBIfam MtnX-like HAD-IB family phosphatase 4 198 IPR006384 GO:0016791
Phco10g01828 279 SUPERFAMILY HAD-like 5 186 IPR036412 -
Phco10g01828 279 PIRSF PLP_phosphatas_PHOSPHO2 1 239 IPR016965 GO:0016791
Phco10g01828 279 NCBIfam HAD-IB family phosphatase 5 187 - -
Phco10g01828 279 Gene3D - 2 189 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01828 Phco-Chr10 40571803 40573662 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01828 10 40571803 40573662 Phco1g00286 1 2079573 2081308 PCT
Phco1g00287 1 2082752 2084726 Phco10g01828 10 40571803 40573662 PCT