Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco8g02577 ATGATGGCAATGGTGAAGTACTTAGCATACCCTCTCACCAACCCTGGTTCTCCAAGGCCTCAACTCTGCACCTTACCTTCTATCCACAATCTTCAACACACCAACCAACCCTCTCTCTCTTCCGTCAAACCTCTTCACATTTCATACGCTCACAACTTTGCTTTGCCACCAGAACTCAGAAGGAGGGTCACAGCGTGCCAGGCCTATGAAGCAGACAGGTCACGCCCACTGGAGCTTAACATTGAGCTTTCTGACGAAGAAACAGGGACAGAAACAACCCAGAGACTCAAAATTGGTTTGTATTTTGCCACCTGGTGGGCTTTGAATGTTGTCTTCAACATATACAACAAGAAGGTTCTGAATGCCTTTCCTTACCCCTGGCTTATTTCCACTTTGTCCCTTGCTGCTGGCTCTCTCATGATGTTAATCTCATGGGCCACAAGGGTTGCTGATGTTCCAAAACTTAATCTGGAGTTCTGGAAGGCCCTCTTTCCTGTTGCTGTGGCACACACAATTGGGCATGTTGCAGCTACTGTGAGTATGTCCAAAGTTGCAGTTTCATTCACCCACATCATCAAGAGCGGAGAGCCTGCTTTCAGTGTCCTGGTATCAAGGTTCTTGCTTGGGGAAGCATTCCCTGTGCCGGTTTACCTGTCACTGCTGCCAATTATAGGAGGTTGCGCACTTGCTGCTGTGACGGAGCTGAATTTCAATATGATTGGATTTATGGGCGCTATGATATCCAATTTGGCCTTTGTCTTCCGGAATATATTCTCAAAGAAGGGAATGAAAGGCATGTCTGTTAGTGGAATGAATTACTATGCTTGTCTTTCCATATTATCTCTATTGATTCTCACACCTTTAGCCATTGCTGTGGAGGGCCCAAAGCTGTGGGCTGCAGGCTGGCAAACAGCCTCGTCTCAGATTGGTCCCAATTTTGTCTGGTGGGTAGCTGCTCAGAGTGTCTTTTACCACTTGTACAATCAAGTATCTTACATGTCCCTTGATCAGATTTCTCCCTTAACATTTAGCATAGGGAACACAATGAAGAGAATTTCGGTTATTGTGTCTTCAATCCTTATCTTCCACACACCAATTCAGCCTGTCAATGCTCTTGGTGCAGCCATTGCAATTCTTGGTACCTTCCTCTATTCACAGGATTTCAAGCTACTTTCTTTGAGGTCGTAG 1188 0.4579 MMAMVKYLAYPLTNPGSPRPQLCTLPSIHNLQHTNQPSLSSVKPLHISYAHNFALPPELRRRVTACQAYEADRSRPLELNIELSDEETGTETTQRLKIGLYFATWWALNVVFNIYNKKVLNAFPYPWLISTLSLAAGSLMMLISWATRVADVPKLNLEFWKALFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGEAFPVPVYLSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGMSVSGMNYYACLSILSLLILTPLAIAVEGPKLWAAGWQTASSQIGPNFVWWVAAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVSSILIFHTPIQPVNALGAAIAILGTFLYSQDFKLLSLRS 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco8g02577 395 Pfam Triose-phosphate Transporter family 96 385 IPR004853 -
Phco8g02577 395 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 96 386 IPR004696 GO:0016020|GO:0022857|GO:0055085
Phco8g02577 395 PANTHER SOLUTE CARRIER FAMILY 35 97 386 - -
Phco8g02577 395 SUPERFAMILY Multidrug resistance efflux transporter EmrE 138 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco8g02577 Phco-Chr8 36887387 36889890 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco8g02577 8 36887387 36889890 Phco8g02577 8 36887387 36889890 ECH
Phco8g02577 8 36887387 36889890 Phco11g00787 11 5702340 5704428 PCT