Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco11g00135 ATGGTAGAAATGAAGGGAGTGATGAATGCAATGCATGGGCTGAAACCAGTGTTGTTGATGGTGTTAGTGCAAATTGCATACACTGCTGTCAATGTGCTTTTCAAACTAGCCATAAACGATGGAATGAGTGTGAAAGTTGCTACAGCATATCGTCTGGCTTTTGGATCTGCTTTCACTGTTCCTCTTGCTCTCATTTCTGAAAGGAACAAAAGACCAAAGATGACTTGGAGAGTGCTTTTCATGGCATGCCTTTGTGGATTATTCGGGGGAAGTTTATTTCAAAATCTTTTCTACGAGTCCTTGGCCATAACATCAGCAACGTTTGCCTCCGCTCTCTACAATCTCATTCCAGCTATCACCTTTGTATTGGCCATATCCTGCGGTTTCGAAAGGTTGAATTTGAGGGCAGCCGCAGGAAGGGCCAAGGTGTTGGGAACTATAATTGGAATTGGTGGGGCAATGTTGTTGACTTTTATCAAAGGTGCAGAAATTAATATCTGGCCCTTCCACATCAACCTTATGCATCCACATCAGCACCAAGATAGCCACGTGGCACAGTTTAATTCTGACTCTAGCAATAAGTTGTTGGGGGCTCTCTGTTCCATAGCAAGCTGCTTCTCTTTTTCTCTCTGGCTCACCATTCAGGCTAAGATGAGCAAAGAATACCCTTGTCACTATTCAAGCACGGCTCTGATGTCTACAGCAGGAGCAATACAAGCCACTGCTTTTGGTTTCTGTGTTGAGAGAGATTTGAGCCAATGGAAGTTGGGTTGGAATATTAGGCTACTTGCTGTGGCTTATTCGGGAATCGTGGCCTCTGGAATAGTAGTTATTATTACTGCATGGTGCATACAAATGAGAGGGCCTCTGTTTGCGTCTGTTTTCAACCCCCTAATGCTTGTGCTTGTGGCTATTGCTGGTTCTTTGATGTTGAACGAGAACTTGTATGTAGGAAGTGTGGTCGGAGCAGTGCTGATTGTGTCTGGGTTGTACATGGTTCTGTGGGGTAAAAGTAAAGAGATGAAAAACATCACTCAGTTAGTTCCATCAGAGACCATTCGAGAAGTTGAAGCTGTAGAAGTTGTTGTGGTGTCGACGCCAATGGATCAAGACAAACGTGACCACAAAAACCGAAGCGAGATCACTGATACTACGAGGAATGTTGACAAAGATTGTGAGGATTTGACCAAAAATAAGGAGACTGATGATGATATTCGCGTGTAG 1224 0.4387 MVEMKGVMNAMHGLKPVLLMVLVQIAYTAVNVLFKLAINDGMSVKVATAYRLAFGSAFTVPLALISERNKRPKMTWRVLFMACLCGLFGGSLFQNLFYESLAITSATFASALYNLIPAITFVLAISCGFERLNLRAAAGRAKVLGTIIGIGGAMLLTFIKGAEINIWPFHINLMHPHQHQDSHVAQFNSDSSNKLLGALCSIASCFSFSLWLTIQAKMSKEYPCHYSSTALMSTAGAIQATAFGFCVERDLSQWKLGWNIRLLAVAYSGIVASGIVVIITAWCIQMRGPLFASVFNPLMLVLVAIAGSLMLNENLYVGSVVGAVLIVSGLYMVLWGKSKEMKNITQLVPSETIREVEAVEVVVVSTPMDQDKRDHKNRSEITDTTRNVDKDCEDLTKNKETDDDIRV 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco11g00135 407 PANTHER WAT1-RELATED PROTEIN 15 348 IPR030184 GO:0016020|GO:0022857
Phco11g00135 407 SUPERFAMILY Multidrug resistance efflux transporter EmrE 256 339 - -
Phco11g00135 407 MobiDBLite consensus disorder prediction 370 407 - -
Phco11g00135 407 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 156 - -
Phco11g00135 407 Pfam EamA-like transporter family 15 157 IPR000620 GO:0016020
Phco11g00135 407 Pfam EamA-like transporter family 196 334 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco11g00135 Phco-Chr11 860920 862879 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco11g00135 11 860920 862879 Phco11g00135 11 860920 862879 ECH
Phco4g02346 4 44592359 44597217 Phco11g00135 11 860920 862879 PCT
Phco11g00135 11 860920 862879 Phco4g02344 4 44564115 44566370 PCT