Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02344 ATGGATACTTTATACAAAGTTGACGCCACAGGTAATGTGAAGCCTGTACTGTTAATGATACTGCTCCAGACTCTATATTCAGTGGTGAATATCATGTTAAAGATGGTAGCAAATGATGGAATGAGTTTAAGTATTCTTGTTGCCTACCGGTTCATCTTTGCTTCTGCCTTCATTGTTCCCCTTGCTCTCATCATTGAGAGGAAACATCTGCAATATGTTACTGCACAAGTTGTATTCCAAGGTCTTCTTTGTGGGTTATTTGGGGGATCCTTACTACAAGGTCTCTACGTTAAATCGTTGGCCTTGACATCTGCAGCATATGTTTCAGCCATGTTGAATCTCATCCCTGCTGTCACCTACCTTTTGTCTGTTGCTCTCGGACTTGAGAAGTCAAATCTTGGAACAGCAGGTGGCATGGCCAAGTTGGTGGGAACTTTAACAGGAATTGGTGGTGCCATGATCCTCACTTTCTACGAAGGAAGAAAGCTATGCCTCTGGTCAACACATCCTAGCTTCTTGCACCATGCACCATCACCACATGGTGCCCCCACAGGTTCTCTCTGGTGGGGCTGCATACTAGCCTTTGGAGCCGCTTTGAGCTACTCGGTGTGGTTGATAATCCAGACAAAGATGAGCGAAAAGTTTCCGTGGCACTATTCAATTGCAGCTTTAACATCTTCAACAGCCTCAATCCTATCCGTTATATTTGCTCTTTATACGGAGAGAGATTGGGGGCAGTGGAAACTTGGTTGGAACTTTAGGCTTTTAACAGCAGCCTCTGCGGGAATTTTGGCCTCTGGAGTGTGTTACACCCTTTTAGCGTGGTGTGTGCGAAGGAAGGGACCACTATTTGCGTCTGCTTTTAGTCCTCTAATGCTGGTGATTGTGACCCTTTTCGAGCCACTGGTACAAGATGAGTGTCCCGACCTTGGAAGTGTTATAGGATCAGTGTTAGTTGTGGGGGGATTGTACATGTTGTTGTGGGGAAAAGGCAAGGAAACACAGATGAAGCAGAATGAGGTGTTCTCAAAAGACTTTGTTCAATGTGAAGCAAACCACATTACCAGCACATCTGTGCCATGCTGCCAAAGAGATCAAGACAACAAGATTGTAGCAAGTGTTCCTTCTTATGCACCATCAACTATCAACCATTCCTGA 1158 0.4499 MDTLYKVDATGNVKPVLLMILLQTLYSVVNIMLKMVANDGMSLSILVAYRFIFASAFIVPLALIIERKHLQYVTAQVVFQGLLCGLFGGSLLQGLYVKSLALTSAAYVSAMLNLIPAVTYLLSVALGLEKSNLGTAGGMAKLVGTLTGIGGAMILTFYEGRKLCLWSTHPSFLHHAPSPHGAPTGSLWWGCILAFGAALSYSVWLIIQTKMSEKFPWHYSIAALTSSTASILSVIFALYTERDWGQWKLGWNFRLLTAASAGILASGVCYTLLAWCVRRKGPLFASAFSPLMLVIVTLFEPLVQDECPDLGSVIGSVLVVGGLYMLLWGKGKETQMKQNEVFSKDFVQCEANHITSTSVPCCQRDQDNKIVASVPSYAPSTINHS 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02344 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 158 - -
Phco4g02344 385 PANTHER WAT1-RELATED PROTEIN 14 337 IPR030184 GO:0016020|GO:0022857
Phco4g02344 385 Pfam EamA-like transporter family 15 139 IPR000620 GO:0016020
Phco4g02344 385 Pfam EamA-like transporter family 188 327 IPR000620 GO:0016020
Phco4g02344 385 SUPERFAMILY Multidrug resistance efflux transporter EmrE 238 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02344 Phco-Chr4 44564115 44566370 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02344 4 44564115 44566370 Phco4g02344 4 44564115 44566370 ECH
Phco11g00135 11 860920 862879 Phco4g02344 4 44564115 44566370 PCT