Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g02346 ATGAATCGTATAGTGAAAGTGGTGCAAGAGTTGAAGCCTCCCTTGCTGATGGTGCTGGTGCAGGTTGCATATGCCGGAAACACTATGATCGCCAGCCTCGCCATAAGTGATGGAATGAGCATTAGAGTATATAGTGCCTACCGTCACACTTTGGGAGCTGCTTTCACATTTTTTCTTGCTCTTATCTTCGAAAGAAAGAGCGGGGCAAAGTTGACATGGAGGGTGCTCGTGATGACATTTTTTTGCGGATTATTTGGAGGGAGTTTATTCCAAAACCTTTTTTTCACCGCGGTTTCGTTCGTATCTGCAACATATGCTAACGCTATTATCAATATGATTCCTGTGGTTACTTTCATCCTCTCCTTCCTTTTCGGCTACGAAAAGTTAAATTTGCAAAGCGCAGCAGGGAAAGCTAAGGTGATGGGAACGATAATTGGAGTTAGTGGTTCAATGATGCTGTCATTCTTGAAAGGGGTAGAAATAAATATTTGGAAGAATATTCACATTAATCTTATGCATAAAAAGGACAATAGTCGGATAGGAGCATCAGATGGAAGACAGTGGATAGGTGTTCTAAGTGGTATTGGATGTTGCTTCAGTTTTTCAGTATGGCTCATCATTCAGACTAAGCTGAGTGAGGAATATCCCAGCCACCACTCAAGTACATCGTTAATGAATTTAATGGCGGCAATACAAGCCACACTCTTTGCCCTTTGTGTTGAGAAAGATTGGAATCAATGGAAGTTGCCTTCGGCTATTAGGGTTCTGGCGGTACTCTATTCGGGAATTGCGGTCACTACATTTGTGAATATTGTGACTTCATGGTGTGTACGGAAGAGAGGTCCATTATATGCATCTGTGTTCAATCCCCTTAGCCTTGTGCTCGTGGCTGCTGCTGCTTCCTTGTTATTACCAGAGAAACTATACCTAGGAAGTGTACTTGGTGCAGTGCTAATTGTGTGTGGCTTGTACATGGTGCTGTGGGGTAAAAGCAAAGAAATGAAACCACCAACTGATTTGGAGAGAGAATTAAGAACGACCGAGGTTGTTGTCGTGTCTGCGAACGAGAAGAGTGAGCATGTTAGCAATAACCAGGTGAATAGTAAGAACAACATTGTAACAAAGGCTCATAAATGA 1137 0.4257 MNRIVKVVQELKPPLLMVLVQVAYAGNTMIASLAISDGMSIRVYSAYRHTLGAAFTFFLALIFERKSGAKLTWRVLVMTFFCGLFGGSLFQNLFFTAVSFVSATYANAIINMIPVVTFILSFLFGYEKLNLQSAAGKAKVMGTIIGVSGSMMLSFLKGVEINIWKNIHINLMHKKDNSRIGASDGRQWIGVLSGIGCCFSFSVWLIIQTKLSEEYPSHHSSTSLMNLMAAIQATLFALCVEKDWNQWKLPSAIRVLAVLYSGIAVTTFVNIVTSWCVRKRGPLYASVFNPLSLVLVAAAASLLLPEKLYLGSVLGAVLIVCGLYMVLWGKSKEMKPPTDLERELRTTEVVVVSANEKSEHVSNNQVNSKNNIVTKAHK 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g02346 378 PANTHER WAT1-RELATED PROTEIN 12 341 IPR030184 GO:0016020|GO:0022857
Phco4g02346 378 Pfam EamA-like transporter family 14 138 IPR000620 GO:0016020
Phco4g02346 378 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020
Phco4g02346 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 147 - -
Phco4g02346 378 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g02346 Phco-Chr4 44592359 44597217 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g02346 4 44592359 44597217 Phco4g02346 4 44592359 44597217 ECH
Phco4g02346 4 44592359 44597217 Phco11g00135 11 860920 862879 PCT
Phco11g00136 11 875517 877643 Phco4g02346 4 44592359 44597217 PCT