Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01645 ATGGTGTTGCAGAAGAGGTTATATTATAGCTTTAATGGATATCAGGTGCCAACCAAGCGCCGAGCTACTAGATCAGCTAGGAGGAACGCTACATTTCAAAGAAGGTTGGAAGACAATCAAATGTGTGCATTTGACTTATTGGCCACCGTAGCTGACAATTTATTGCAAGAGAAACAGAATCCAACCACATATAGTGATAGGTCAATGGGAAAAGATAGGGATGGATTTGTAAAAGAGGAGTGCCAGAATGCAAATAAACCATTAAAAACTGAGCTTTCTGATGAAGCAAGTTGTGACAGAAGATGTCAGCATGAATTTGTTAAAGAAGGATGCCCAGATGCAAATAAACCATTAAAACCTGAGCTTTCAGACGAAGGAAGTACTGATAGAAAAGGTTTCTCTAATATTTCTTCCCAAGTATACAATCAAAATTGTTGTTTGAAGGAATTCCCCATTCATGAAATTGAAGGCCATTCAGGCATTGCTTCTATAGTAACAAGTTCTAGTTGCTCAGAGAAGTTTGTTGCTGAAAAACTGGTGGATGGGAAAGGCCAAAATGGAACGGAAAATTTAGCCAGCAAAGTTGAATTAGGTTCCTCTGGAAGTCCAGAGAGTATTGGTTGCAAGTTAGACGGTGATGTAAGTAAAGTAAAAGATGTTAAGTTTGGGAAGGTTCCCATGGATACTGGAACTGGGTTGTGCTGTTCTGAGGATCCCTTGGATGAAAAACCTGCAGCACTGATAAGTTCTTGTGGCAATGCCAAGTTGTCTGGGTATGATGACAGCATTCCTCATAGCTCATTGTCCAAAGGCTGTGACAATATGCTAGTAGATAGTAGAGATGATGACGAAAACTTTTCTGGGTGTGCTCACCCTAGTAACAAAATAAAGTCCACTAGACCAATTACTTGTATAGATGATAGAAAAATAAAGAAAAGATTGGCTTCAAAATATCATAAAGCTGCTCAAGAATCCAAGCCTGATAAGTTATCTAATAGTGTTTTGGATGGAAATTTGAAGCCAGTTTACAGCAATAGGAAGAACTACTATAAAAGCCAAAGATCTCAAATGAACATTCCTTTCAAAAAGAGGAAGCTTTTTAAATGTGGCTCTGATACAAATTCTAACGGATATATCAGAAGTGGCGACACTTATTTTTCACTCAAGAATGAAACAAATCAAAGTGTTTCATATTCATCTTCTGGGATGAGTAAAGATCATGGAACATCATCCTTGGGACACTCTGCATTACGATCTAGAGATTCTCATGTGAAGCTTAGGATCAAATCATTTAGAGTGCCCGAGCTTTTAATTGAGATTCCAGAAACTGCAACCATTGGGTCCTTAAAGAGGACAGTGATGGAGGCAGTGACTGCAGTACTTGGAGGTGGATTACGTGTGGGAGTGATTCTCCATGGAAAGAAGGTTAGAGATGACAGTAAAACTCTACTGCAGACTGGAATTTCTCATGATAACCACTTGGATGCTTTGGGATTCGCCTTGGAGCCTAATTTTTCACAAAATCTACCACCTGCATGTGCTACTAGTTCTCTTCGCATTCCTAGTGCGGATATGCCTCAACCTTTTATAGGGTATCCTTCAAGTCCTGCTGTAATTCATCAAAGGATTCAGGGCTTTTCTAACACGTTAGCTGAGCATCAAGCAACAGGTTTAGGTAACCTTGTCGAAAGTGATCATGATTCAGCACCTTCTCCCATCAACACATTAGGTGAAAAAATATTGTCAGATTCTAAAGAACTTATTACTGTTCCTGAAATGGGTATGGAGGCACTAGCCGTGCTTCCTGGACATCAAAAGTCAAAGCGAACTGAGATTGCACAACGCCGAATTCGTAGGCCTTTTTCCGTTGCTGAAGTGGAAGCATTGGTTCAAGCAGTTGAGAAACTTGGAACTGGAAGGTGGCGTGATGTTAAGCTTCGTGCTTTTGATAATGCAAAGCATCGAACATACGTGGATTTGAAGGATAAATGGAAAACACTGGTGCACACAGCAAGAATATCCCCTCAGCAAAGGAGGGGAGAGCCTGTTCCTCAAGAACTTTTGGATAGGGTCCTAACTGCCCACGCATATTGGTCCCAGCTGCAGACTAAGCAACAGCTCAAGCACCACTCAAAACCTTGCCTTCTCCTTTAA 2154 0.4067 MVLQKRLYYSFNGYQVPTKRRATRSARRNATFQRRLEDNQMCAFDLLATVADNLLQEKQNPTTYSDRSMGKDRDGFVKEECQNANKPLKTELSDEASCDRRCQHEFVKEGCPDANKPLKPELSDEGSTDRKGFSNISSQVYNQNCCLKEFPIHEIEGHSGIASIVTSSSCSEKFVAEKLVDGKGQNGTENLASKVELGSSGSPESIGCKLDGDVSKVKDVKFGKVPMDTGTGLCCSEDPLDEKPAALISSCGNAKLSGYDDSIPHSSLSKGCDNMLVDSRDDDENFSGCAHPSNKIKSTRPITCIDDRKIKKRLASKYHKAAQESKPDKLSNSVLDGNLKPVYSNRKNYYKSQRSQMNIPFKKRKLFKCGSDTNSNGYIRSGDTYFSLKNETNQSVSYSSSGMSKDHGTSSLGHSALRSRDSHVKLRIKSFRVPELLIEIPETATIGSLKRTVMEAVTAVLGGGLRVGVILHGKKVRDDSKTLLQTGISHDNHLDALGFALEPNFSQNLPPACATSSLRIPSADMPQPFIGYPSSPAVIHQRIQGFSNTLAEHQATGLGNLVESDHDSAPSPINTLGEKILSDSKELITVPEMGMEALAVLPGHQKSKRTEIAQRRIRRPFSVAEVEALVQAVEKLGTGRWRDVKLRAFDNAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLTAHAYWSQLQTKQQLKHHSKPCLLL 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01645 717 CDD SANT_TRF 619 669 - -
Phco10g01645 717 Gene3D - 606 710 - -
Phco10g01645 717 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 710 IPR031105 -
Phco10g01645 717 SUPERFAMILY Ubiquitin-like 419 509 IPR029071 -
Phco10g01645 717 SUPERFAMILY Homeodomain-like 619 700 IPR009057 -
Phco10g01645 717 ProSiteProfiles Myb-like domain profile. 613 668 IPR001005 -
Phco10g01645 717 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 613 672 IPR017930 -
Phco10g01645 717 SMART sant 617 670 IPR001005 -
Phco10g01645 717 MobiDBLite consensus disorder prediction 396 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01645 Phco-Chr10 39134930 39138875 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01645 10 39134930 39138875 Phco10g01645 10 39134930 39138875 ECH
Phco10g01645 10 39134930 39138875 Phco2g02665 2 56299602 56302890 ECH
Phco10g01645 10 39134930 39138875 Phco9g00715 9 5284089 5287903 PCT