Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g02665 ATGGTGTTGAAGAAGAGGGTAGATTATGGATTTAATGGCTTTCGAGTTCCTATTATACCTAAAGCTCCTAGATCTGTAAGGAGGAGGGGTCCTTTCAACAAAGCAACTGAGGATGGTCGAGTTTGTGCTATTGAACTATTGGCATCTTTAGCTGGCCAATTGCTGCAGGAGAGTGAAAGTTCTGCTTCCAGCAACGCATCTGAAGGAAATCGTCAACCTGCCTTTAGCCAAGGTGTCATTGAGCAAGACAGACAAGGTGAAGTTAAACCCTTAAAAAAGGAGGAAATTCACCAGGGAAGCTGTGCTGAGAGTACTTTTAAGACTGAGGTAGGGTCACAAAACAGTAGCCAGAAACCTCTTCCACATGCCAAGACTGATTTTTCACAAGGACATGTTTCAGTTAATAATGATTCTGACATTTGGGAGAAAGTTCAAGCTGATGTGAAGTCTGAAATTTTCAAATGGGATAATAAATTTGGGAATTATTCTAATAGATTAGTAGAACCATCTGAAAAGTTTAGGGAGTCCAGTGATTGTAAGATGAAGAATGGATTTAAACAGGAAATGAAAGCTGGCAGTTCATGCTTTAGGGGATCAAATTTGGCTGATAAATGTAGTTTGAAAGACCACATAGAATTGTATGTATCTCCTACACTAATTAACTCAAAAAGTAATATTAAATCTCCATTTCATAGGAAATCTTCTCCCAGTGCTTCCTTTTCCAGGCATGGGAATGTTGTTAAATTAGGTTCTAGAGATGATGACGAAAACTTTTTAAGGTGCAAAAGAGTTTGCACAAAGTCAAAGGCTTTTAGGTCTCCAAGGCGCATTGCACATAGAAGAATCAGGAATTTGATGTCTTCTAAATACTGGAAGACAGCTCCAAAGCTGAAAGACTGTGAACTTTCTAGATCTGATTTAGGAGTACCTCATTATCATAAGAGGAAGACTTGCTATGGTTTTGAAAGATCTCAGCACAACACTATTATTAAGAAGAGGAAAATCGTTGATCGGGTTTCAGGAGTAACTTCTGATGGAGGATTCAGCAGTGAGAGTGTGTCCAATTCTCCTCAGAAAGGGACGGATGGAGACAAGCCTAGCTCATCTGCAAAACTGCATCTAGCTAAGGCTAAGGATTCCCATGTAAAGTTTAGCATTAAGTCGATAAGGATACCAGAGCTTTATATTGAGGTTCCTGAAACTGCCACTGTTGGTTCGCTAAAGAGGACAATCATGGAGGCGGTGATGGCTATACTGGGAGGGGGCGCGCACGTTGGTGTTCTTCATCATGGGAAAAAAGTTAGAGATGACAATAGGACACTTGTGCAGACTGGTATATCTTGCAATGAAAATTTGGATACCCTGAGTTTCATGTTGGAGCCCGTTTCTCTTCAAGTTTCTCCAACCGTTTGTGTTGGTGATCCTTCTTCTCAATGTGAAACATCCCAGCTCACCAGGCCCATAGAAACTCCTGCCCTAGATTCAGGGATTACTGATACCTTGCATGACTCACCCTTGGTGACATATCCGGGCAACCTAATCGAAAGTAACCATGAGTCTACTTATTCACTCGCCGACACTACAATTGACAAAATAACACCTGATTCCAGAGCGCTGGTTCCTGTTCCAGATAGCACAGAAGCATTAGCTGTGGTTCCAGTGAGTCAGAAAATCAAGCGCTCTGAGTTTGTACAGCGTCGAACCAGGAGACCATTCTCTGTGTCTGAGGTAGAAGCACTTGTCCACGCAGTTGAGGAACTTGGAACTGGGAGGTGGCGTGATGTTAAGTTGCGAGCTTTTGAGAATGCAGACCATAGGACTTATGTAGACTTAAAGGATAAATGGAAAACATTGGTGCACACTGCAACCATCTCCCCTCAACAAAGGAGAGGAGAGCCAGTGCCTCAGGAGCTCTTGGACAGAGTTTTGGCTGCTCATGCTTTCTGGTCTCAGCACCAAGCCAAGCAGCATGGAAAGCATCAAGCTGGATCTGGGACCTTGAAGATTACAGAAGCCTCAGCTGAAAGACCGTGTGTTTGTTGA 2043 0.4273 MVLKKRVDYGFNGFRVPIIPKAPRSVRRRGPFNKATEDGRVCAIELLASLAGQLLQESESSASSNASEGNRQPAFSQGVIEQDRQGEVKPLKKEEIHQGSCAESTFKTEVGSQNSSQKPLPHAKTDFSQGHVSVNNDSDIWEKVQADVKSEIFKWDNKFGNYSNRLVEPSEKFRESSDCKMKNGFKQEMKAGSSCFRGSNLADKCSLKDHIELYVSPTLINSKSNIKSPFHRKSSPSASFSRHGNVVKLGSRDDDENFLRCKRVCTKSKAFRSPRRIAHRRIRNLMSSKYWKTAPKLKDCELSRSDLGVPHYHKRKTCYGFERSQHNTIIKKRKIVDRVSGVTSDGGFSSESVSNSPQKGTDGDKPSSSAKLHLAKAKDSHVKFSIKSIRIPELYIEVPETATVGSLKRTIMEAVMAILGGGAHVGVLHHGKKVRDDNRTLVQTGISCNENLDTLSFMLEPVSLQVSPTVCVGDPSSQCETSQLTRPIETPALDSGITDTLHDSPLVTYPGNLIESNHESTYSLADTTIDKITPDSRALVPVPDSTEALAVVPVSQKIKRSEFVQRRTRRPFSVSEVEALVHAVEELGTGRWRDVKLRAFENADHRTYVDLKDKWKTLVHTATISPQQRRGEPVPQELLDRVLAAHAFWSQHQAKQHGKHQAGSGTLKITEASAERPCVC 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g02665 680 SUPERFAMILY Ubiquitin-like 378 454 IPR029071 -
Phco2g02665 680 MobiDBLite consensus disorder prediction 58 129 - -
Phco2g02665 680 FunFam Telomere repeat-binding protein 1 558 661 - -
Phco2g02665 680 SUPERFAMILY Homeodomain-like 570 651 IPR009057 -
Phco2g02665 680 MobiDBLite consensus disorder prediction 58 79 - -
Phco2g02665 680 MobiDBLite consensus disorder prediction 101 129 - -
Phco2g02665 680 ProSiteProfiles Myb-like domain profile. 564 619 IPR001005 -
Phco2g02665 680 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 661 IPR031105 -
Phco2g02665 680 MobiDBLite consensus disorder prediction 85 100 - -
Phco2g02665 680 SMART sant 568 621 IPR001005 -
Phco2g02665 680 MobiDBLite consensus disorder prediction 341 372 - -
Phco2g02665 680 CDD SANT_TRF 570 620 - -
Phco2g02665 680 Gene3D - 557 661 - -
Phco2g02665 680 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 565 623 IPR017930 -
Phco2g02665 680 MobiDBLite consensus disorder prediction 343 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g02665 Phco-Chr2 56299602 56302890 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01645 10 39134930 39138875 Phco2g02665 2 56299602 56302890 ECH
Phco2g02665 2 56299602 56302890 Phco2g02665 2 56299602 56302890 ECH