Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00715 ATGGTCTTGCAGAAGAGGTTAGAGTACGGATTTAATGGCTATCAGGCTCCTGCCATGCCCCGAGCTTCTCGCTCAGTTAGGAGGAGGGCTAAATTTCAAAGAGCAGAAGACAAGCAAAAGTGTGCATTTGACTTATTGGCCACCGTAGCTGGTAAACTATTACAAGAGAGAGAGAATCCAGCCATTTCTAGCTATACATCATCAAATAAGGATCAGTGTAGATTTGTCAAAGAGTACCATGATGCAAATAAACCATCCAAATCTGAGCTTTCTGACGAAAGAAGTTGTGACAAAAAAAGTTTGAAAGAATTCCCACATCTTGCAATTGATGACCATGCAAAGATTGCTTCTATAGTAGCAAGTTCTAGTCGCTTAGAGAGGTTCATTGCAAAAAAGTTGGTGGATGGCAATAGCCATATCAAAATGGAAAATGTTACTGGAGAAGTCAAATTAGATTCTTCTGGTTACCCAAAGGATAGTCATTTCAAGATAGATGGCGATAGAAGTAAAGGAAAGGATGGGATGCATGAGTTGGAGAAGGTGCCAATTGGCAGTGGGATTGAGATGTACAGTTTTGGGGATCCGCTGGATGAAAATCCTCCTGCGTTGATCAGTTTAGGTGGGAATGCCAAATTGTCTGGGTATAATGATAGGATTCCGTGTAGCTTGTTGTCCAAAGGTTGTGACAATGTAGCAGTAGTTAGTAGAGATGATGATGAAAACTCTTCTGGGTGTACTCACCTTATTAATACTAAAACCAGGACCTTTAGGCCGAAGAATTGTATAGGTGATAGTGCAATAAGTAAAAGACTGGCTTCTAACTTTCAGAAAGTTGCTCAAAAACTGAAGCATGACACACTTTCTAACAGTGATGGAGTTTGGAAGAAAACTTACCACAATCAGAGGAAGTGCAATAAACGCCAAATTTCTCAGATGAACATTCCTTTCAAAAAGAGGAAGCTTTTTAATTATAAGTCTGTTTCAAATTCTAAGGGATTTACCAGGAGTGGTGGGATTTATTATTCACCCAAGAATTATATTAATCAGGATGCTTGTGGTTCACTTCCTGGGATGCACAGAGACCCTGGAATACCATCCTTGGAAGCATGTCAACACCAGGTGTTACGACGAATAGGTTCTCATGTGAAGCTTAGGATCAAGTCATTTAGGGTGCCAGAGCTTTTTATAGAGGTTCCAGAAACTGCAACAATTGGGTCCTTGAAGAGGACAGTAATGGATGCAGTGACTGCTGTACTCGGAGGTGAATTGCACATTGGTGTTTTTCTCCAGGGAAAGAAAGTTAGGGATGACAGTAAAACACTACTTCAAACTGGAATTTCTCATCATAACCAGCTTGATGCTTTGGGTTTCACCCTGGAGCCTAATTCTTCACAAAGCCTACCCATTGTCTGTGCTGCACATTCTCCCCGTCCTAGTGCTGACATAACTCCGCCTGTAATAAGGTGTCCTTCCCGTCCCGCTGTAATTCATCAGAGCATTCAAGGCAATTCTGACATGTTACCTGAGCATCAAGTAACCAGTTTTGGTAGCCAATTTGAAAGTGATAATGATTCGGCACCTTCTCCTGCTAACATTTATGTTGACAAAGGTATGGAAGATTCCAAAGAATTGGTTACAGTTCTTGAAAAGGGTAACGAGGAACTAGCTATGGTATCTGTACCCCAGAAGCCAAGGCGATCCGAGGTGGTACAGCGCCGATTACGTAGGCCTTTTTCTGTAGATGAAGTAGAAGCACTGGTTCAAGCAGTTGAAAAACTAGGAACCGGAAGGTGGCGTGATGTTAAGCTTTGTGCTTTCGATAATGCAAAGCATCGGACATATGTGGATTTGAAGGATAAATGGAAAACACTAGTACACACGGCGAGAATATCCCCTCAGCAAAGAAGGGGTGAACCTGTTCCCCAAGAACTTTTGGACCGGGTTATAGTGGCCCACGCATTTTGGTCCCATCAGCAGACTAAGCAGCAGCATCCGGAAACTGAAACCGTCTTCTCCTTCAATCGTAAAAGCCAGGGGTTGTCATCTGCAAGTGGCCATGTGGATGAGAGTGTTTTGGTTTCTGACTTTTGTTATTAG 2097 0.4239 MVLQKRLEYGFNGYQAPAMPRASRSVRRRAKFQRAEDKQKCAFDLLATVAGKLLQERENPAISSYTSSNKDQCRFVKEYHDANKPSKSELSDERSCDKKSLKEFPHLAIDDHAKIASIVASSSRLERFIAKKLVDGNSHIKMENVTGEVKLDSSGYPKDSHFKIDGDRSKGKDGMHELEKVPIGSGIEMYSFGDPLDENPPALISLGGNAKLSGYNDRIPCSLLSKGCDNVAVVSRDDDENSSGCTHLINTKTRTFRPKNCIGDSAISKRLASNFQKVAQKLKHDTLSNSDGVWKKTYHNQRKCNKRQISQMNIPFKKRKLFNYKSVSNSKGFTRSGGIYYSPKNYINQDACGSLPGMHRDPGIPSLEACQHQVLRRIGSHVKLRIKSFRVPELFIEVPETATIGSLKRTVMDAVTAVLGGELHIGVFLQGKKVRDDSKTLLQTGISHHNQLDALGFTLEPNSSQSLPIVCAAHSPRPSADITPPVIRCPSRPAVIHQSIQGNSDMLPEHQVTSFGSQFESDNDSAPSPANIYVDKGMEDSKELVTVLEKGNEELAMVSVPQKPRRSEVVQRRLRRPFSVDEVEALVQAVEKLGTGRWRDVKLCAFDNAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVIVAHAFWSHQQTKQQHPETETVFSFNRKSQGLSSASGHVDESVLVSDFCY 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00715 698 SUPERFAMILY Homeodomain-like 576 656 IPR009057 -
Phco9g00715 698 Gene3D - 564 667 - -
Phco9g00715 698 SUPERFAMILY Ubiquitin-like 380 465 IPR029071 -
Phco9g00715 698 CDD SANT_TRF 576 626 - -
Phco9g00715 698 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 571 629 IPR017930 -
Phco9g00715 698 SMART sant 574 627 IPR001005 -
Phco9g00715 698 ProSiteProfiles Myb-like domain profile. 570 625 IPR001005 -
Phco9g00715 698 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 667 IPR031105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00715 Phco-Chr9 5284089 5287903 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01645 10 39134930 39138875 Phco9g00715 9 5284089 5287903 PCT