Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g00934 ATGGCATCAGCACCAACACTTTCCAAAGTTTCTCTCTCTGTTGTGTTGCTTTTCCTTTCACTTTCTGCATCTTGTGCAATTTCTCATCGCCTCATCCATGACCCTGCCAACCCACCAGACCCAAAGGAACCAGTTAACATCATAAAAAGTGACCATGAAGCTTTTGTCTCTGGTAAGATCGTGGAGAAGAAGTTCTCGTTTTTTGCTCATTCTGGGCCTCCTGTTGAAGACCTTGGTCACCATGCAGGCTACTATTCACTTCCTCATTCCAAAGCTGCAAGAATGTTCTACTTTTTCTTTGAATCACGGAAGAGCAGGAATGATCCTGTTGTCATATGGTTGTCTGGAGGACCAGGGTGTGGAAGTGAATTAGCTTTGTTTTATGAAAATGGTCCTTTTCATATTACCAATAACTTGTCTCTTACATGGAATCATTACGGCTGGGATCAGGAATCAAATATTATATTTGTTGACCAACCCACTGGGACAGGTTTTAGTTACTCTTCTGATGACAGTGACGTTCGCAACGATGAAACCGGCGTTAGTATTGATTTATATGATTTCTTGCAGGAGTTTTTCAAGGCGCATCCTGATTTCGTTAACAATGACTTCTACATCTTTGGTGAATCATATGCTGGACACTATGTTCCTGCACTTGCATCTCGGGTTAACCAAGGAAATAAGCAAAATCAAGGACTTCATATAAACCTCAAGGGTTTTGCTATTGGTAACGGGTTAACCAATCCTGCAATTCAATACCAAGCATACCCAGATTTTGCATTAGACAACAGAATAATTACCAAGGCTCAGTACGACAACGTCAACATCTTAATGCCAGACTGTGAACAAGCCTCTAAAACTTGTGAAACTCAAGGTGGAAATAGTTGCTTCAGAGCGTTACGTATTTGTGAAGACATTTTCGAACGTATCCTGGACTTCACCGACAACATTAATTACTATGACATCAGAAAGAAATGTGAGGGGGATTTGTGCTACAACTTCACAAACGTGGAGACGTTGCTAAACATGCAGAAAGTGAAGAGTGCTTTAGGTGTTAGGGATGACTTGAAGTATGAGTTATGCAGTGATGCTGTTCATGAGGCTATGATGCAAGACTGGATGAGAAACCTGGAAGTGGGGATTCCTGCTCTTCTTGAGGATGGAATCAAGTTGCTCGTTTATGTTGGGGAGGAAGATCTCATATGCAATTGGCTTGGGAATTCAAGGTGGGTTCATGCCATGGAGTGGTCAGGCCAAAAGGCCTTTGGAAAATCTCCTGATGTGAAATTCGTGGTTCATGGTGCAGAAGCAGGTTCTCTTAATAGCTATGGACCCCTCTCTTTCCTCAAGGTACATAAGGCTGGGCACTTGGTCCCTATGGATCAACCAAAAGTTTCACTTGAGATGTTCAAACGTTGGATGGGAGGGAAAATGACCAAACATAAACATAAACATAAGGAGATAATTAAACATAAACCAAACACCATGTAA 1491 0.4178 MASAPTLSKVSLSVVLLFLSLSASCAISHRLIHDPANPPDPKEPVNIIKSDHEAFVSGKIVEKKFSFFAHSGPPVEDLGHHAGYYSLPHSKAARMFYFFFESRKSRNDPVVIWLSGGPGCGSELALFYENGPFHITNNLSLTWNHYGWDQESNIIFVDQPTGTGFSYSSDDSDVRNDETGVSIDLYDFLQEFFKAHPDFVNNDFYIFGESYAGHYVPALASRVNQGNKQNQGLHINLKGFAIGNGLTNPAIQYQAYPDFALDNRIITKAQYDNVNILMPDCEQASKTCETQGGNSCFRALRICEDIFERILDFTDNINYYDIRKKCEGDLCYNFTNVETLLNMQKVKSALGVRDDLKYELCSDAVHEAMMQDWMRNLEVGIPALLEDGIKLLVYVGEEDLICNWLGNSRWVHAMEWSGQKAFGKSPDVKFVVHGAEAGSLNSYGPLSFLKVHKAGHLVPMDQPKVSLEMFKRWMGGKMTKHKHKHKEIIKHKPNTM 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g00934 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 192 217 IPR001563 GO:0004185|GO:0006508
Phco9g00934 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 144 156 IPR001563 GO:0004185|GO:0006508
Phco9g00934 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 446 459 IPR001563 GO:0004185|GO:0006508
Phco9g00934 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 157 167 IPR001563 GO:0004185|GO:0006508
Phco9g00934 496 FunFam Carboxypeptidase 68 486 - -
Phco9g00934 496 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 76 463 IPR001563 GO:0004185|GO:0006508
Phco9g00934 496 Pfam Serine carboxypeptidase 77 475 IPR001563 GO:0004185|GO:0006508
Phco9g00934 496 Gene3D alpha/beta hydrolase 59 491 IPR029058 -
Phco9g00934 496 SUPERFAMILY alpha/beta-Hydrolases 78 477 IPR029058 -
Phco9g00934 496 ProSitePatterns Serine carboxypeptidases, serine active site. 206 213 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g00934 Phco-Chr9 7561472 7564240 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g00934 9 7561472 7564240 Phco10g01475 10 37441595 37445044 PCT