Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04499 ATGTCAATTGCTGAGTTTGCGTTGAGTTCAGTTATCAAAGAGAAAGGGCAATGGGAAGGACAACCGGGACATTGTTCTGATGAGCCAATCTTGATTTATCTCACGGTGGATGGCGCTGTGACCCCAATGCGCGTGTTGGAGTCTGATTCCATTGCTTCGGTGAAACTGAGGATTCAGCAGTGCAAAGGCTTCGTGGTGAAAAAGCAGAAGTTGGTTTTTGGTGGCAGAGAGCTAGCTCGCAGTGGCACACTTATCAAGGAGTATGGTGTCGCTGATGGCAATGTTCTTCACATGGTTCTTCGCCTCTCTGATCTTCTTTTCATTGTCGTGAGGACCGTTTCTGGGAAGAAGTATGAGTTCCACATCGATAGACACCGAAATGTGGGTTATCTGAAGCAACGGATTAGAAAAAAAGGGGATGGTTTCATCGATCTAGAGGATGATCAAGAGCTTTTCTGCGATGATGAGAAGCTCGATGACCAGAGAGTCTTCCATGACATATGCAAGAGTGACGACGATGTGATTCATTTGATAATTAAGAAATCGGCCAAGGTTAAGACCACACCGATTCGCAAGGATTTGAAGCTCTCCGTGAAGGCAACAGGTGAGAGAATAAAACTTAATAGGGACAAACATGTTCAGATATCAAATGTGCCACCAGATGTATGTTTCTGGTTGGAACCAATTATTCTGAATCCCAAGATCAATATTCTTCCTTTCCTTTGGGATATGATACACTCCACATTTGAAGGTCTGAAGAGAGGAAATGACCCTATTAGGTCCTCTGAGGGCACTGGAGGGACTTACTTCATGCAAGATTCAACAGGTCAGGAGTATGTTTCTGTTTTTAAGCCAATGGATGAGGAACCCATGGCTGTGAACAACCCAAGAGGTCTTCCAAGTTCATCCAATGGCGAAGGTTTGAAAATAGGGACAAAGGTTGGTGAAGGAGCCTTGAGGGAAGTTGCAGCATACTTGTTGGATCATCCAAAGAGTGGGCCACGTTTGTTGTCAGGTGAAGAAGTAGGGTTTTCTGGTGTTCCCCCTACTGTAATGGTGCAGTGCCTGCACAAAAAGTTTAACCACCCAAATGGGTTTTCTTGCTCCTCAAAAGATGTTAAGATCGGGTCACTGCAGAAGTTCACTAGTAATGATGGTAACTGTGAGGACTTTGGACCCTGGGCTTTCCCAGTGGAGGAAGTGCATAAGATTACTGTGCTTGATATTAGATTGGCCAATGCAGACAGGCATGGTGGGAATATATTGATCAGAAAGGAGGAAGGTGGCCAGATAAAGCTCATTCCTATTGATCATGGCTACTGTCTACCAGATAAATTTGAAGATTGCACATTTGATTGGCTTTACTGGCCGCAAGCGCGTCAGCCTTTCTCTCCTGAGACAGTTGAATATATAAATTCTCTGGATGCTGAAAAAGACTTGGAGCTTTTGAAATGTTATGGTTGGGATATTCCGCTTCAGTGTGCTAGAACACTTCGCATTTCCACAATGTTGCTGAAGAGAGGGGTTGAGAGAGGCCTTACTCCCTATGAAATTGGAAGCATTATGTGTCGGGAAAATTTGAACAAGGAATCTGTGATTGAAGAGATTATCATGGAAGCCCAAGATTCCTTGCTTCCTGGCATGGAGGAACCAGAATTTCTTGAAGCCATCTCGCGGAGCATGAATTCCCACCTTGATAAGCTTGCAAACTAG 1713 0.4442 MSIAEFALSSVIKEKGQWEGQPGHCSDEPILIYLTVDGAVTPMRVLESDSIASVKLRIQQCKGFVVKKQKLVFGGRELARSGTLIKEYGVADGNVLHMVLRLSDLLFIVVRTVSGKKYEFHIDRHRNVGYLKQRIRKKGDGFIDLEDDQELFCDDEKLDDQRVFHDICKSDDDVIHLIIKKSAKVKTTPIRKDLKLSVKATGERIKLNRDKHVQISNVPPDVCFWLEPIILNPKINILPFLWDMIHSTFEGLKRGNDPIRSSEGTGGTYFMQDSTGQEYVSVFKPMDEEPMAVNNPRGLPSSSNGEGLKIGTKVGEGALREVAAYLLDHPKSGPRLLSGEEVGFSGVPPTVMVQCLHKKFNHPNGFSCSSKDVKIGSLQKFTSNDGNCEDFGPWAFPVEEVHKITVLDIRLANADRHGGNILIRKEEGGQIKLIPIDHGYCLPDKFEDCTFDWLYWPQARQPFSPETVEYINSLDAEKDLELLKCYGWDIPLQCARTLRISTMLLKRGVERGLTPYEIGSIMCRENLNKESVIEEIIMEAQDSLLPGMEEPEFLEAISRSMNSHLDKLAN* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04499 570 ProSiteProfiles Ubiquitin domain profile. 106 184 IPR000626 GO:0005515
Phac2g04499 570 Gene3D - 24 104 - -
Phac2g04499 570 SUPERFAMILY Protein kinase-like (PK-like) 411 568 IPR011009 -
Phac2g04499 570 SUPERFAMILY Ubiquitin-like 34 103 IPR029071 -
Phac2g04499 570 ProSiteProfiles Ubiquitin domain profile. 32 101 IPR000626 GO:0005515
Phac2g04499 570 FunFam Phosphatidylinositol 4-kinase gamma 4 27 106 - -
Phac2g04499 570 SMART ubq_7 106 180 IPR000626 GO:0005515
Phac2g04499 570 SMART ubq_7 30 101 IPR000626 GO:0005515
Phac2g04499 570 Gene3D - 107 197 - -
Phac2g04499 570 Pfam Phosphatidylinositol 3- and 4-kinase 264 518 IPR000403 -
Phac2g04499 570 CDD Ubl_ubiquitin_like 108 178 - -
Phac2g04499 570 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 255 552 IPR000403 -
Phac2g04499 570 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 39 543 IPR044571 -
Phac2g04499 570 SUPERFAMILY Ubiquitin-like 101 181 IPR029071 -
Phac2g04499 570 Pfam Ubiquitin family 36 102 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04499 Phac-Chr2 42801799 42804880 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04499 1 569 Acyl Lipid Metabolism Gene Families AT5G24240 56.545 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04499 - - gmx:100809172 1008.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g04499 2 42801799 42804880 Phac2g04499 2 42801799 42804880 ECH
Phac2g04499 2 42801799 42804880 Phac10g01468 10 37760361 37763667 ECH
Phac2g04499 2 42801799 42804880 Phac2g00327 2 1595053 1598196 PCT