Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g00327 ATGTCGGCTGCTGAGGTTGCTGTGAGACCGGCTCTGAAAGAATCGGTGCAGTGGCAAGGGCGTTGTCCTGGCGAATCAATCCTGATATATATAACCGTAGGCGGTGCTGTGACGCCAATGCGTGTGTCTGAATCTGATTCGATTGCTTCGGTGAAAATGAGGTTTCAGACATGCAAAGGAATTTCTGGGAATAGGCACAAGCTGGTCTATGGTGGCAGAGAGCTTGCCCGCAACGATGCACTCATCAAGGACTATGGTGTCAATGGTAGCAATGTTCTTCACTTGGTTCTCCGTCTCTCTGACATGATCTTCATTGTTGTAAGAACCACCGGTGGGAAGGAGTTTGAGTTTCAGATTGATCGACATAGAAATGTGGGGTACCTCAAGCAACACATTAAGAAGAAGGGGAGAGATTTGATTGATCTTGAGGGTTGTCAAGAGCTTTTCTGCGACGGGGAAGAGCTCCATGATCAGACCCTCTTCCGTGACTTTTGCAACGCGGATGATGGTGTGATTCATTTGGTGGTTCAAAAATCAGCGAAGGTTGATGCCAAACCGGTTCACAAGGATTTGGAGCTTTCGGTTGTTGCTGATGATGTCTCTGGTGTGGGAGGGAATCACGTGACGCCAAAGATACAACAACAAAGTGTGGATTTCTGGTTTGAACCAGTTTTTGTGAATCCTAATGTCAATCTGTTTCCTTTCCTTTGGGACATGATTGGGTCCACATTCGATGGTTTGAAACAGGGGAATCACCCTGTCAGGTCCTCTGAGGGCACTGGTGGGAGTTACTTCATGCAAGATTCAACAGGTATGGAGTATGTTTCGGTTTTCAAGCCCATTGATGAGGAGCCAAATGCAGTGAATAACCCACAAGGGCTACCGGTTTCAACCAACGGTGAAGGTTTGAAGAGAGGGACAAGGGTAGGAGAAGGAGCTGTGAGAGAAGTTGCAGCATATATATTGGATCATCCAAGGGCAGGGCCAAGGTTGGAGACAGGTGAAGCAATAGGCTTTGCTGGGGTTCCCCCAACTGCTATGGTCCAGTGCCTACACCAAGACTTTAACCACCCAGATGGGTTTGATTTCTCCCCAGAGCATTCCAAGGTGGGGTCACTGCAGATGTTTATGAAGAATGATGGTAACTGTGAGGACCTTGGACCAGGGGCTTTTTCTGTAGAGGAGGTGCATAAGATCACTGTGCTTGATCTAAGAATGGCTAATGCAGATAGGCATGCTGGGAATATACTATTCAGGAAAGATGCAGATGGTCGTACTTTCCTCATTCCCATTGATCATGGCTATTGTCTACCAGAGAATTTTGAGGATTGCACATTTGATTGGCTTTACTGGCGCCAAGCACGTCAACCATACTCTGCTGACACAGTTGAATATATTAAATCTTTGGATGCTGAGAGAGATATAGAGCTTCTGAAATACTATGGGTGGGATGTTCCGGTAGAGTGTGCAAGAACACTCCGCATCTCCACAATTTTATTGCAGAAAGGGGTTGAGAGAGGTCTCACTCCCTATGACATTGGAAGCATTATGTGTAGGGAAGATTTGAACAAGAAATCTGTAATCGAGGAGATTATTTGTGAAGCCCAGGAATCATTGCTACCTGGAATGGGAGAATCTCTGTTTCTTCAATCTGTCTCCCAGATCATTGATTCCCGAATTGACAAGCTTTCAAAATAA 1698 0.4605 MSAAEVAVRPALKESVQWQGRCPGESILIYITVGGAVTPMRVSESDSIASVKMRFQTCKGISGNRHKLVYGGRELARNDALIKDYGVNGSNVLHLVLRLSDMIFIVVRTTGGKEFEFQIDRHRNVGYLKQHIKKKGRDLIDLEGCQELFCDGEELHDQTLFRDFCNADDGVIHLVVQKSAKVDAKPVHKDLELSVVADDVSGVGGNHVTPKIQQQSVDFWFEPVFVNPNVNLFPFLWDMIGSTFDGLKQGNHPVRSSEGTGGSYFMQDSTGMEYVSVFKPIDEEPNAVNNPQGLPVSTNGEGLKRGTRVGEGAVREVAAYILDHPRAGPRLETGEAIGFAGVPPTAMVQCLHQDFNHPDGFDFSPEHSKVGSLQMFMKNDGNCEDLGPGAFSVEEVHKITVLDLRMANADRHAGNILFRKDADGRTFLIPIDHGYCLPENFEDCTFDWLYWRQARQPYSADTVEYIKSLDAERDIELLKYYGWDVPVECARTLRISTILLQKGVERGLTPYDIGSIMCREDLNKKSVIEEIICEAQESLLPGMGESLFLQSVSQIIDSRIDKLSK* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g00327 565 CDD Ubl_ubiquitin_like 105 175 - -
Phac2g00327 565 SUPERFAMILY Ubiquitin-like 27 100 IPR029071 -
Phac2g00327 565 ProSiteProfiles Ubiquitin domain profile. 103 181 IPR000626 GO:0005515
Phac2g00327 565 SMART ubq_7 103 177 IPR000626 GO:0005515
Phac2g00327 565 SMART ubq_7 27 98 IPR000626 GO:0005515
Phac2g00327 565 Pfam Phosphatidylinositol 3- and 4-kinase 259 512 IPR000403 -
Phac2g00327 565 MobiDBLite consensus disorder prediction 285 306 - -
Phac2g00327 565 SUPERFAMILY Ubiquitin-like 98 178 IPR029071 -
Phac2g00327 565 Gene3D - 104 191 - -
Phac2g00327 565 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 37 538 IPR044571 -
Phac2g00327 565 Pfam Ubiquitin family 34 99 IPR000626 GO:0005515
Phac2g00327 565 Pfam Ubiquitin family 105 178 IPR000626 GO:0005515
Phac2g00327 565 Gene3D - 27 103 - -
Phac2g00327 565 ProSiteProfiles Ubiquitin domain profile. 25 102 IPR000626 GO:0005515
Phac2g00327 565 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 250 547 IPR000403 -
Phac2g00327 565 SUPERFAMILY Protein kinase-like (PK-like) 406 563 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g00327 Phac-Chr2 1595053 1598196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g00327 1 564 Acyl Lipid Metabolism Gene Families AT5G24240 55.478 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g00327 - - gmx:100787492 957.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g04499 2 42801799 42804880 Phac2g00327 2 1595053 1598196 PCT