Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac10g01468 ATGTCTTCTGCTGGTGTTACCATCCTTAGCCCTGTTCCAAGGGAACTGTTGTTGTTCCCAGATGGATACCATTGGTCCCCACTGCACTTGTCATTGGATCCTGAGTTTATTTTCATATATCTCTCCCATTCTGGATCTTTGACTCCGATGCGAGTCCTTCCGTACGATACCATTGAGTCGGTGAAACTCAAAATCCAAAAGGGGCTTCCTTCATTGACAAACAAACAAAAGTTGGTTTGTGATGGGCGGGAGCTAGCGCGGAGCAATTCCCTGCTGAAGGACTATGGGGTGACTGAAGGAAATGTTTTGTATTTGGTGATTAGGCTGTCGGATCTCCAGACCATCAGTGTGAGAACCTCTTCCGGAAAAGACTTTACTTTTCAGGTGGAGAGATGCAGAGATGTTGGGTATGTTAAGCAGCAAATTGCGAAAAAGGAGAAGCATTTTGCTGATCCTGAACAGCAGGAGGTTGTGTGTAACGGGGAGCTGCTTGAGGATCAGAGGGTTATTGATGATATCTGTAGTAAATATAATGATGCAGTGATTCGTCTTTTTGTTAGAGAGAAATATGCAGAAGTTAGTACAGGACAAGATGAGTTGTCCGTCAAGGCGAGGGAGTTGAATGGTACAAAAGATTACGATGTTAGTGAAAATAATTGTAGGAGAGAACATGATGTTAGTAAAGAAGATCCGGGAAGAGAGGATGAAGCTGCTGAGCAAATTGTGCCAAGGAAGACTGTTGATAGAAATCTTCTTTTGGAACCTGTCATTGTTAATAAGAAAATTGAATTAGCTTCAGAGATTTGGAATATGATAAACTTTACATATGAAGGACTAACTAGTGGAAATTATCCAATCAGATCTGCAGAGGGTACAGGGGGAGCTTACTTTATGCTTGATTCAACCGGGCAAAAGTATGTAGCTGTTTTTAAGCCCATTGATGAAGAGCCAATGGCTGTGAATAACCCTAGAGGTTTACCTTTCTCAGTAGATGGTGAAGGCTTAAAGAAGGGTACGAAAGTTGGTCAGGGTGCATTCAGGGAAGTTGCAGCTTATATTTTGGACCATCCAATGAGTGGTCGTCGATCATTATTTGGTGATCAGAAGGGCTTTTCTGGGGTTCCCCCGACTGTTATGGTTAAGTGTTTGCATGAAGGATTTAACCATCCTGGGGACTTGACTACTAAGCTTGGCTCCTTGCAAATGTTCATGGAGAATAATGGAAGTTGCGAGGATATGGGTCCTGGGGCATTTCCAGTGAAGGAAGTGCATAAAATTACTGTTCTGGACATGAGACTCGCAAATGCAGATAGACACGCTGGGAATATTTTGATAGGCAAAGAGGATGAAAATGACCAGCCTGTTTTGATTCCAATTGATCATGGATACTGCTTGCCCACTAGTTTTGAAGATTGTACCTTTGAATGGCTTTATTGGCCCCAAGCTCGCCAACCATACTCCCCTGAGATCATTGACTATATAAGATCACTGAATGCCGATGAAGATATTGCCCTTTTGAAGTTTCATGGATGGAATCTGCCAGTTGAATGTGCCCGCACTCTTCAGATCTCAACCATGCTTCTGAAGAAAGGAGTGGAGAGAGGGATGACACCCTTTGCCATTGGAAGCCTAATGTGTAGGGAATCCTTGAACAAGGAGTCTGTGATAGAGGGAATTGTAAAGGCAGCTCTGGATTCTGTTCTTCCTGGCACAAGTGAAGAAACATTTCTGGATGCTGTTTCTGAAATCATGGACCAGCACCTTGATGAGATTCTGTCATAG 1782 0.4315 MSSAGVTILSPVPRELLLFPDGYHWSPLHLSLDPEFIFIYLSHSGSLTPMRVLPYDTIESVKLKIQKGLPSLTNKQKLVCDGRELARSNSLLKDYGVTEGNVLYLVIRLSDLQTISVRTSSGKDFTFQVERCRDVGYVKQQIAKKEKHFADPEQQEVVCNGELLEDQRVIDDICSKYNDAVIRLFVREKYAEVSTGQDELSVKARELNGTKDYDVSENNCRREHDVSKEDPGREDEAAEQIVPRKTVDRNLLLEPVIVNKKIELASEIWNMINFTYEGLTSGNYPIRSAEGTGGAYFMLDSTGQKYVAVFKPIDEEPMAVNNPRGLPFSVDGEGLKKGTKVGQGAFREVAAYILDHPMSGRRSLFGDQKGFSGVPPTVMVKCLHEGFNHPGDLTTKLGSLQMFMENNGSCEDMGPGAFPVKEVHKITVLDMRLANADRHAGNILIGKEDENDQPVLIPIDHGYCLPTSFEDCTFEWLYWPQARQPYSPEIIDYIRSLNADEDIALLKFHGWNLPVECARTLQISTMLLKKGVERGMTPFAIGSLMCRESLNKESVIEGIVKAALDSVLPGTSEETFLDAVSEIMDQHLDEILS* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac10g01468 593 ProSiteProfiles Ubiquitin domain profile. 37 108 IPR000626 GO:0005515
Phac10g01468 593 SUPERFAMILY Ubiquitin-like 89 187 IPR029071 -
Phac10g01468 593 SMART ubq_7 113 187 IPR000626 GO:0005515
Phac10g01468 593 SMART ubq_7 37 108 IPR000626 GO:0005515
Phac10g01468 593 Gene3D - 37 110 - -
Phac10g01468 593 SUPERFAMILY Ubiquitin-like 32 110 IPR029071 -
Phac10g01468 593 CDD Ubl_ubiquitin_like 115 185 - -
Phac10g01468 593 Gene3D - 113 196 - -
Phac10g01468 593 Pfam Phosphatidylinositol 3- and 4-kinase 291 540 IPR000403 -
Phac10g01468 593 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 282 575 IPR000403 -
Phac10g01468 593 ProSiteProfiles Ubiquitin domain profile. 113 172 IPR000626 GO:0005515
Phac10g01468 593 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 46 564 IPR044571 -
Phac10g01468 593 SUPERFAMILY Protein kinase-like (PK-like) 428 591 IPR011009 -
Phac10g01468 593 Pfam Ubiquitin family 43 109 IPR000626 GO:0005515
Phac10g01468 593 Pfam Ubiquitin family 115 188 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac10g01468 Phac-Chr10 37760361 37763667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac10g01468 1 590 Acyl Lipid Metabolism Gene Families AT5G24240 53.782 0.0 615
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac10g01468 - - gmx:100815111 1071.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac10g01468 10 37760361 37763667 Phac10g01468 10 37760361 37763667 ECH
Phac2g04499 2 42801799 42804880 Phac10g01468 10 37760361 37763667 ECH