Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g01723 ATGCCCACATCAAAACCACTATATATATTACTTCTCCACAACACTTCTCTCCAAAACCATCCAACAAGGAATTCGAATATTGATTATTTTCCATCCTTTCCTATATTCATTCCCCAACTTTCAACCATGGCCCCTTCAACTCAATTCTCCACCACTTTCCTCTCGCTATGTCTCTTCCAATTCATAGCAGGTTCGTATTCAGCGACATTCACCATTGTGAACAAGTGCAGCTACACAGTGTGGCCCGGCATATTATCCAGCGCCGGAACCTCGCCGCTCTCCACCACCGGCTTTGTTTTACAGCCCGGCGAGTCCAACGTTGTCGGCGTGCCACCCGCCTGGTCCGGCCGCCTCTGGGGGCGGACCCTCTGCTCACAAGACGCCACCGGGAAATTCTCCTGCGTCACCGGCGACTGTGGCTCCGCCGTGGAATGCGCCGGAGGTAACGCCGCCCCGCCGGCCACTCTTGCAGAGTTCACGCTGAACGGAGCCGGCGGGCTGGATTTCTTCGACGTGAGCCTGGTCGACGGTTACAACCTGCCAATGATCGTGGAGCCCCAGGGCGCAACCGGCGGCGGAAACTGCACCGCAACGGGGTGCGTGGTGGACCTGAACACGCCGTGCCCCTCGGAGCTCAAAGTGACGAGCAGCGGTGAGGGCGTGGCGTGTAGAAGCGCGTGCGAAGCTTTCGATGATCCACAGTATTGCTGCAGTGGTGCTTACGCGACACCTGACACATGCAAACCCAGTTCCTACTCGCAGTTCTTCAAGAGCGCGTGCCCACGCGCTTATAGCTACGCTTACGACGATGGTTCCAGCACCTTCACTTGCGCCTCTGCTGATTATACCATCACTTTCTGCCCGCAACCCTCCACAAGTTCGATAAAATCGGGGAACCCAATGGCGGTGGAAACCTCTGGAGCTGATTTAGACGGAAGATACAACAGTGTTATGGCGGTGATTCTTTGTGTTCTTGTGGCGTTTGTGGCAACTCAATTTGGTGGCCTTTCACTGGCAGTGTCGTAA 1026 0.5546 MPTSKPLYILLLHNTSLQNHPTRNSNIDYFPSFPIFIPQLSTMAPSTQFSTTFLSLCLFQFIAGSYSATFTIVNKCSYTVWPGILSSAGTSPLSTTGFVLQPGESNVVGVPPAWSGRLWGRTLCSQDATGKFSCVTGDCGSAVECAGGNAAPPATLAEFTLNGAGGLDFFDVSLVDGYNLPMIVEPQGATGGGNCTATGCVVDLNTPCPSELKVTSSGEGVACRSACEAFDDPQYCCSGAYATPDTCKPSSYSQFFKSACPRAYSYAYDDGSSTFTCASADYTITFCPQPSTSSIKSGNPMAVETSGADLDGRYNSVMAVILCVLVAFVATQFGGLSLAVS* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g01723 341 SMART tha2 70 288 IPR001938 -
Phac2g01723 341 SUPERFAMILY Osmotin, thaumatin-like protein 68 289 IPR037176 -
Phac2g01723 341 PRINTS Pathogenesis-related protein signature 278 287 IPR001938 -
Phac2g01723 341 PRINTS Pathogenesis-related protein signature 117 128 IPR001938 -
Phac2g01723 341 PRINTS Pathogenesis-related protein signature 168 184 IPR001938 -
Phac2g01723 341 PRINTS Pathogenesis-related protein signature 130 159 IPR001938 -
Phac2g01723 341 PRINTS Pathogenesis-related protein signature 69 81 IPR001938 -
Phac2g01723 341 Pfam Thaumatin family 74 288 IPR001938 -
Phac2g01723 341 CDD TLP-PA 69 287 - -
Phac2g01723 341 ProSiteProfiles Thaumatin family profile. 67 288 IPR001938 -
Phac2g01723 341 PANTHER OS03G0233200 PROTEIN 55 288 IPR001938 -
Phac2g01723 341 FunFam THAUMATIN-LIKE PROTEIN 1 68 288 - -
Phac2g01723 341 Gene3D Thaumatin 68 288 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g01723 Phac-Chr2 19035835 19038188 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g01723 43 293 Receptor kinase-like Gene Family AT5G38280 51.953 4.62e-86 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g01723 - - pvu:PHAVU_002G107900g 690.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g00070 9 550039 554066 Phac2g01723 2 19035835 19038188 ECH
Phac2g01723 2 19035835 19038188 Phac2g01723 2 19035835 19038188 ECH
Phac11g00489 11 3492170 3503271 Phac2g01723 2 19035835 19038188 ECH