Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac9g00070 ATGGATCAACTCAAACTATCACTTCCATTTTTACAAACACTTCTTCTGTTACTGTTAGCATCAGGTGCCGTATCAACAACAACGTTCACAGTGGTTAACAAATGCGACTACACAGTGTGGCCAGGTATTCTCTCAAACGCAGGAATCGCGGCGCTTCCAACAACCGGTTTCCTTCTCCAACCCGGCGACTCCAAAACCGTAACGGCTCCAACCTCTTGGGGTGGCCGTTTATGGGGCCGCACTCTCTGCACGCAAGACTCCGCCGGAAAATTCTCCTGCGTGACCGGCGATTGTGGCTCCGGCAAGCTCGAATGTGCGGGCAACGGCGCTTCGCCACCGGCGACCTTGGCCGAGTTCACCCTCGACGCCGACGGAGGCCTCGATTTCTTCGACGTGAGCCTCGTGGACGGTTACAACGTGCCGATGCTGGTGGCTCCCAAGGGTGGGTCCGGCTATAACTGCACCAGCACGGGATGCGTTGGAGACCTCAACGGCGCGTGTCCTCCGGAGCTTAGGGTTACAAGCGTGGATGGAAAACAGGGCGTGGCATGTAAGAGCGCGTGCGAGGCGTTCGGGTCCCCGCAGTATTGCTGCAAAGGCGCGTATGGGTCGCCCAAAACTTGCAAGCCTACGGCATATTCGCAGATTTTCAAGAACGCTTGCCCACGCGCCTACAGCTACGCGTACGATGACAAGACCAGCACTTTTACATGCGCTTCTTCTGCTGACTACACGATCACTTTTTGCCCTTCCCCTCAAGATAACCCCAGTCAGAAATCGTGGCAGGGGCAAAACCCGAAATCAGATAGCAGTAGTTCTTCTTCTTCTTCTTCTTCTTCTTCTGATTCGCCGCCACTTAACAATGGGACAATGGTGTATGTTGGTGCCATGGATGAAAGTGAATTATCATGGTCAGTAGGTACCCATGTGACTGTGAAGGAATCTCAAGCCATTGCTGGTTTTGTCAGTATCACCATTGCTCTTTGGCTCTTGTGCCACTTATAG 1005 0.5343 MDQLKLSLPFLQTLLLLLLASGAVSTTTFTVVNKCDYTVWPGILSNAGIAALPTTGFLLQPGDSKTVTAPTSWGGRLWGRTLCTQDSAGKFSCVTGDCGSGKLECAGNGASPPATLAEFTLDADGGLDFFDVSLVDGYNVPMLVAPKGGSGYNCTSTGCVGDLNGACPPELRVTSVDGKQGVACKSACEAFGSPQYCCKGAYGSPKTCKPTAYSQIFKNACPRAYSYAYDDKTSTFTCASSADYTITFCPSPQDNPSQKSWQGQNPKSDSSSSSSSSSSSSDSPPLNNGTMVYVGAMDESELSWSVGTHVTVKESQAIAGFVSITIALWLLCHL* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac9g00070 334 SMART tha2 29 250 IPR001938 -
Phac9g00070 334 CDD TLP-PA 28 249 - -
Phac9g00070 334 ProSiteProfiles Thaumatin family profile. 26 250 IPR001938 -
Phac9g00070 334 MobiDBLite consensus disorder prediction 253 287 - -
Phac9g00070 334 SUPERFAMILY Osmotin, thaumatin-like protein 27 251 IPR037176 -
Phac9g00070 334 FunFam THAUMATIN-LIKE PROTEIN 1 27 250 - -
Phac9g00070 334 PRINTS Pathogenesis-related protein signature 128 144 IPR001938 -
Phac9g00070 334 PRINTS Pathogenesis-related protein signature 240 249 IPR001938 -
Phac9g00070 334 PRINTS Pathogenesis-related protein signature 28 40 IPR001938 -
Phac9g00070 334 PRINTS Pathogenesis-related protein signature 76 87 IPR001938 -
Phac9g00070 334 ProSitePatterns Thaumatin family signature. 89 105 IPR017949 -
Phac9g00070 334 Gene3D Thaumatin 27 250 IPR037176 -
Phac9g00070 334 PANTHER OS03G0233200 PROTEIN 16 250 IPR001938 -
Phac9g00070 334 Pfam Thaumatin family 33 250 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac9g00070 Phac-Chr9 550039 554066 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac9g00070 1 268 Receptor kinase-like Gene Family AT5G38280 51.648 3.72e-94 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac9g00070 - - gmx:100780102 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac9g00070 9 550039 554066 Phac2g01723 2 19035835 19038188 ECH
Phac9g00070 9 550039 554066 Phac9g00070 9 550039 554066 ECH