Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac11g00489 ATGGGTCGCCGGCTTCTCTTTCTCATCTTTCTCACCCTTGTCGCATTAGCTTTCCTCTCAGAGGTTCAATCAGCATCGTTCAGGATTGTGAACAAGTGTCGCCACACGATATGGCCGGGATTACTCTCCGGCGCCACCTCGCCGCCGCTTCCCACCACCGGATTCGCTCTCCAGAGCGGAGAATCGAAGACATTAAAAATCCCGAAATCTTGGTCGGGTCGGATATGGGCACGGACCCTCTGCGGTCGAGACCCGGACGGGAAGTTCTCTTGCGCCACCGCGGACTGCGGCTCCGGCAAAGTAGAGTGCGTCGGCGGTGCCAAGCCTCCGGCGACATTGGCAGAGTTCACCCTGAACGGCGCCGACGGGTTGGACTTCTACGACGTGAGTTTGGTCGACGGTTACAACCTCCCGATGCTGATCGTGGCGAAGGACGGCACCAGGGGCGGGTGCAGCGCCACGGGATGTCTCGTCGACCTCAACGGCGGGTGTCCGGCGGAGCTGAGGGTGGCGCGCGTGAACGGCAGCCGCGGGAGCTTGGCGTGCCGGAGCGCGTGCGAGGCCTTCGGTGATCCTCGTTTTTGCTGCAGCGACGCGTACTCGACGCCTGACACGTGTGGTCCTTCTCCTTATTCGCTTTTCTTCAAGCACGCTTGCCCACGCGCGTATAGCTACGCGTATGATGACAAGACCAGCACCTACACATGTGCCTCCGCCAACTATTTGATCATTTTCTGCCCCTTACCCTATTCCAGCCAAAAGCTTTTGGGAGCACGTAAAGATGGGGCAACTCTTCCTCTGGTAAACAAAACTATGATGTACTTGTCAAGGCTACAGTCCAGTGGTTTTTCACCATCAGTTGTGGTTCAAACGCAGAGGGTTATGGGTGCCACCTTCACATTTGTTAACCGATGCGAATACACAGTGTGGCCAGGCATTCTCGCAAATGCGGGTAGCCCACCACTCCAGAGCACCGGCTTCGAGCTTCCCAAGGACACTTCTCGCGCCTTCCAAGCTTCCACCGGCTGGTCCGGTCGTTTCTGGGCCCGAACCGGTTGCACATTCGACGGATCCGGATCCGGCTCCTGCCTCACCGGAGACTGCGGCTCCGGCCAAGTCGAATGCAACGGCGCAGGGGCCGCCCCGCCGGCCACTCTCGCCGAGTTCACGCTGGGCACCGGAGGCCAAGACTTCTACGACGTCAGCCTTGTCGATGGCTACAACCTTCCCATGATCGTGGAGGGTACTGGCGGGTCGGGTCTATGCGCCTCCACGGGCTGCACGTCGGATCTGAACCAGCAATGCCCGGCGGAGCTGAGAGCCTCTGAGGGAAGCGCGTGCAAGAGCGCGTGCGAGGCTTTTGGTAGTCCCGAGTACTGCTGCAGCGGCGCGTACGGCTCACCCGCCACCTGTAGGCCCTCCATTTACTCAGAGATGTTCAAGGCTGCTTGCCCCAGATCGTATAGCTACGCGTACGATGATGCTACCAGTACTTTTACATGTAGCGGCGCTGATTATACCGTTACCTTCTGCCCATCCTCTCCAAGTCAGAAATCTTCACGAGATACCACCAACCCCATGCCCTCAACATCATCATCACAAGGGTCAGGGACAGTGACAGGAACGGAAACAGGAACAGGAATGGGATCCGAAGGAGGAGCAGTGGTGTACACGGGTGCGGAAAACGGCGTTGTGTATGACTCCGTTACGAATTCCGGGTCAAGTTCAGGATCCGGAGGAGAAACAATGCTTGCAGATGGGTCATATTTAGCTGGATTGGCCATGGGAGAGTCCTCCCCCAGAAGAACAGTTTCCATGGCGGTTGTGTCCTCAGCTAGCTTTTTGCTTATTTTCACCTTGCTTTAG 1866 0.5777 MGRRLLFLIFLTLVALAFLSEVQSASFRIVNKCRHTIWPGLLSGATSPPLPTTGFALQSGESKTLKIPKSWSGRIWARTLCGRDPDGKFSCATADCGSGKVECVGGAKPPATLAEFTLNGADGLDFYDVSLVDGYNLPMLIVAKDGTRGGCSATGCLVDLNGGCPAELRVARVNGSRGSLACRSACEAFGDPRFCCSDAYSTPDTCGPSPYSLFFKHACPRAYSYAYDDKTSTYTCASANYLIIFCPLPYSSQKLLGARKDGATLPLVNKTMMYLSRLQSSGFSPSVVVQTQRVMGATFTFVNRCEYTVWPGILANAGSPPLQSTGFELPKDTSRAFQASTGWSGRFWARTGCTFDGSGSGSCLTGDCGSGQVECNGAGAAPPATLAEFTLGTGGQDFYDVSLVDGYNLPMIVEGTGGSGLCASTGCTSDLNQQCPAELRASEGSACKSACEAFGSPEYCCSGAYGSPATCRPSIYSEMFKAACPRSYSYAYDDATSTFTCSGADYTVTFCPSSPSQKSSRDTTNPMPSTSSSQGSGTVTGTETGTGMGSEGGAVVYTGAENGVVYDSVTNSGSSSGSGGETMLADGSYLAGLAMGESSPRRTVSMAVVSSASFLLIFTLL* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac11g00489 621 PANTHER OS03G0233200 PROTEIN 291 512 IPR001938 -
Phac11g00489 621 FunFam THAUMATIN-LIKE PROTEIN 1 297 512 - -
Phac11g00489 621 MobiDBLite consensus disorder prediction 513 547 - -
Phac11g00489 621 CDD TLP-PA 298 511 - -
Phac11g00489 621 ProSitePatterns Thaumatin family signature. 87 103 IPR017949 -
Phac11g00489 621 FunFam THAUMATIN-LIKE PROTEIN 1 25 247 - -
Phac11g00489 621 ProSiteProfiles Thaumatin family profile. 296 512 IPR001938 -
Phac11g00489 621 ProSitePatterns Thaumatin family signature. 359 375 IPR017949 -
Phac11g00489 621 SUPERFAMILY Osmotin, thaumatin-like protein 297 513 IPR037176 -
Phac11g00489 621 CDD TLP-PA 26 246 - -
Phac11g00489 621 PRINTS Pathogenesis-related protein signature 397 413 IPR001938 -
Phac11g00489 621 PRINTS Pathogenesis-related protein signature 502 511 IPR001938 -
Phac11g00489 621 PRINTS Pathogenesis-related protein signature 346 357 IPR001938 -
Phac11g00489 621 PRINTS Pathogenesis-related protein signature 359 388 IPR001938 -
Phac11g00489 621 PRINTS Pathogenesis-related protein signature 298 310 IPR001938 -
Phac11g00489 621 SMART tha2 27 247 IPR001938 -
Phac11g00489 621 SMART tha2 299 512 IPR001938 -
Phac11g00489 621 MobiDBLite consensus disorder prediction 513 553 - -
Phac11g00489 621 Pfam Thaumatin family 31 247 IPR001938 -
Phac11g00489 621 Pfam Thaumatin family 303 512 IPR001938 -
Phac11g00489 621 SUPERFAMILY Osmotin, thaumatin-like protein 26 247 IPR037176 -
Phac11g00489 621 Gene3D Thaumatin 25 247 IPR037176 -
Phac11g00489 621 Gene3D Thaumatin 297 512 IPR037176 -
Phac11g00489 621 ProSiteProfiles Thaumatin family profile. 24 247 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac11g00489 Phac-Chr11 3492170 3503271 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac11g00489 294 520 Receptor kinase-like Gene Family AT5G38280 48.945 2.82e-72 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac11g00489 - - dcr:108222866 827.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac11g00489 11 3492170 3503271 Phac11g00489 11 3492170 3503271 ECH
Phac11g00489 11 3492170 3503271 Phac2g01723 2 19035835 19038188 ECH