Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g3679 ATGGAGAGCACACTTAAGTCCTTTAGAGATGGTGAGTCGGTGCTGGACCTCAGCCCAAGATCCGCCGTTGGTGGCGGTGTTGAGGATGTCTACGGTGAAGATTGTGCTACTGAGGATCAACTTGTCACCCCTTGGACCTTCTCTGTTGCCAGTGGGTACTCTTTGCTGAGGGATCCACAATACAACAAAGGGCTTGCTTTCACCGAGAAAGAGAGGGATGCGCATTATTTGCGTGGCCTCTTACCTCCCACTGTCAGCAGCCAGCAACTTCAGGAGAAGAAGCTTATGCACAACATCCGCCAATATGAGGTTCCTTTGCAAAAGTATGTGGCCATGATGGACCTTCAGGAGAGGAATGAAAGATTGTTTTACAAACTTCTTATTGACAACGTCGAGGAATTGCTCCCAATTGTATATACTCCGGTTGTTGGTGAGGCTTGCCAAAAATATGGGAGCATATACAAGCGTCCTCAGGGTCTATATATTAGTTTGAAAGAGAAGGGAAAAATTCTTGAGGTTTTAAAAAACTGGCCTGAGAGAAGTATTCAAGTTATTGTTGTAACTGACGGTGAGCGGATTTTAGGACTCGGAGATCTTGGATGCCAGGGTATGGGAATTCCTGTTGGTAAATTGGCTCTGTACTCCGCACTAGGTGGAGTTCGTCCTTCAGCATGTTTACCAGTTACAATCGATGTGGGGACAAATAATGAGAAATTACTGAATGATGAGTTTTACATCGGCCTTAGACAAAAGAGGGCAACTGGGAAGGAATACTATGACCTTCTGCACGAGTTCATGACTGCAGTGAAGCAAAACTATGGTGAAAAAGTTCTAGTACAGTTTGAAGATTTTGCAAATCACAATGCTTTTGAATTGCTTGCAAAATACGGTACAACTCATCTTGTTTTCAACGACGATATACAGGGGACTGCAGCTGTTGTTCTAGCTGGAGTTGTAGCATCCCTGAAGTTGATTGGTGGTACCCTACCTGAGCATACATTCCTCTTCCTCGGTGCTGGAGAAGCAGGAACTGGTATAGCTGAGCTAATTGCTCTTGAGATGTCAAAGCAGACTAAGGCACCTATAGAAGAGAGTCGTAAGAAGATATGGCTTGTAGACTCAAAGGGTTTAATTGTTAGTTCACGAGCGAATTCACTTCAACACTTCAAGAAGCCTTGGGCTCATGAACACGAGCCTGTTAGCACTCTCCTAGATGCTGTTAAGATAATCAAGCCTACGGTTCTGATTGGATCATCAGGAGTGGGAAAAACATTTACAAAGGAAGTAGTTGAGGCTATGACAGAAATCAATAAAATTCCTCTCATTTTGGCTCTTTCCAATCCAACCTCACAGTCTGAGTGTACAGCTGAGGAGGCATACACATGGAGTGAGGGTCGTGCTATTTTCGCTAGCGGGAGTCCATTTGATCCTGTTGAATACAAAGGCAAAACTTATTATTCTGGCCAGTCCAACAATGCTTACATTTTCCCAGGCTTTGGTTTGGGTATAGTGATGTCGGGAGCAATCCGAGTACATGATGATATGCTTCTAGCAGCCTCGGAAGCCTTAGCGAAGCAAGTGACAGAGGAGAACTACAAAAAGGGCTTGACGTATCCACCTTTCTCTGATATCAGAAAAATTTCGGCCAACATAGCTGCAAATGTTGCTGCCAAGGCATATGAACTAGGCTTGGCTACACATCTTCCTCGTCCTGAGAATCTTGTCAAGTATGCTGAGAGTTGCATGTATTCCCCTCTGTACCGCAACTATAGGTGA 1776 0.4454 MESTLKSFRDGESVLDLSPRSAVGGGVEDVYGEDCATEDQLVTPWTFSVASGYSLLRDPQYNKGLAFTEKERDAHYLRGLLPPTVSSQQLQEKKLMHNIRQYEVPLQKYVAMMDLQERNERLFYKLLIDNVEELLPIVYTPVVGEACQKYGSIYKRPQGLYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYSALGGVRPSACLPVTIDVGTNNEKLLNDEFYIGLRQKRATGKEYYDLLHEFMTAVKQNYGEKVLVQFEDFANHNAFELLAKYGTTHLVFNDDIQGTAAVVLAGVVASLKLIGGTLPEHTFLFLGAGEAGTGIAELIALEMSKQTKAPIEESRKKIWLVDSKGLIVSSRANSLQHFKKPWAHEHEPVSTLLDAVKIIKPTVLIGSSGVGKTFTKEVVEAMTEINKIPLILALSNPTSQSECTAEEAYTWSEGRAIFASGSPFDPVEYKGKTYYSGQSNNAYIFPGFGLGIVMSGAIRVHDDMLLAASEALAKQVTEENYKKGLTYPPFSDIRKISANIAANVAAKAYELGLATHLPRPENLVKYAESCMYSPLYRNYR* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g3679 591 Pfam Malic enzyme, N-terminal domain 116 296 IPR012301 GO:0004471
Mtr8g3679 591 PANTHER MALIC ENZYME-RELATED 12 591 - -
Mtr8g3679 591 SMART Malic_M_2 307 560 IPR012302 GO:0051287
Mtr8g3679 591 PANTHER MALIC ENZYME 12 591 - -
Mtr8g3679 591 Gene3D - 305 591 - -
Mtr8g3679 591 ProSitePatterns Malic enzymes signature. 303 319 IPR015884 GO:0004471
Mtr8g3679 591 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 307 590 IPR036291 -
Mtr8g3679 591 SMART malic_2 116 297 IPR012301 GO:0004471
Mtr8g3679 591 Gene3D - 50 304 IPR037062 GO:0004471
Mtr8g3679 591 PRINTS Malic enzyme signature 122 146 IPR001891 GO:0004470|GO:0004471
Mtr8g3679 591 PRINTS Malic enzyme signature 182 211 IPR001891 GO:0004470|GO:0004471
Mtr8g3679 591 PRINTS Malic enzyme signature 218 240 IPR001891 GO:0004470|GO:0004471
Mtr8g3679 591 PRINTS Malic enzyme signature 278 296 IPR001891 GO:0004470|GO:0004471
Mtr8g3679 591 PRINTS Malic enzyme signature 303 319 IPR001891 GO:0004470|GO:0004471
Mtr8g3679 591 PRINTS Malic enzyme signature 334 350 IPR001891 GO:0004470|GO:0004471
Mtr8g3679 591 PRINTS Malic enzyme signature 437 453 IPR001891 GO:0004470|GO:0004471
Mtr8g3679 591 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 30 306 IPR046346 -
Mtr8g3679 591 Pfam Malic enzyme, NAD binding domain 307 559 IPR012302 GO:0051287
Mtr8g3679 591 PIRSF ME 24 591 IPR001891 GO:0004470|GO:0004471
Mtr8g3679 591 CDD NAD_bind_1_malic_enz 307 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g3679 Mtr-Chr8 47338604 47343263 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g3679 K00029 - gmx:100782096 1080.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3679 8 47338604 47343263 Mtr8g0386 8 4405599 4411023 ECH
Mtr8g3679 8 47338604 47343263 Mtr2g3549 2 49546362 49551472 ECH
Mtr8g3679 8 47338604 47343263 Mtr3g4110 3 54887725 54892714 ECH
Mtr8g3679 8 47338604 47343263 Mtr8g3679 8 47338604 47343263 ECH