Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3549 ATGGGAAATGGTGTTCATTCCTGGCACTTGTTGAAACAAGTTGCGAGTTACAACCTTTTTAAGCAAAGCAGGACTCTTTCTCGCACTTCCATACCCATCATCATGATCTCCGCAACCAGATGCACCTTCCTGGGTTGCTCAGGATTAGGTGGGAGTGGTAACATCTGTGGTGGACAGAGAAGGGGTTATGGACCTTGGAGGGTGACGTGTATGTCACCAATCAATGATAGAAATGGCAGTGTTGTTAATGTGATGGAGACACCTTTGAAAGAAATTAAAAAGGAAGCAGTGGTGGAAGATGTGGATGATAATCCGATCTCCGGTGGCGGTCCTCGCGATGTTTATGGCGAGGATAAGGCCACTGAGGATCACTTTGTGACTCCTTGGAGTGTTTCTGTTGCTAGTGGTTATACATTGTTGCGAGATCCACACTTCAACAAAGGGTTGGCCTTCACTGAAAAAGAGAGGGATGCACACTACTTGCGTGGTCTTCTTCCCCCAACAACTATTCCTCAAGAAACTCAGGTGAGGAAAATGATCCAGCACATACGCCAATATCAAGTTCCGCTGCAGAGATATATGGCAATGATGGATCTTCAGGAAAGAAATGAACGTCTGTTTTACAAACTTCTCATTGATCACGTTGAAGAATTACTCCCAATTGTGTATACTCCAACTGTTGGTGAGGCTTGCCAGAAATACGGGGACATTTTTATGCGTCCACAGGGTCTTTATATAAGTTTGAAAGAGAAGGGGAGGATTCAAGAAGTACTGAGAAACTGGCCTGAGAAGAACATTCAAGTCATAGTCGTAACTGACGGAGAACGGATCTTGGGTCTTGGGGATCTAGGTTGTCAGGGAATGGGAATACCTGTGGGAAAACTTTCTTTATATACTGCACTAGGAGGAGTTCGTCCTTCAGCTTGCCTGCCTATTACTATTGATGTCGGGACAAACAACGAGAGGCTGCTCAATGATGAATTATATATCGGGCTAAAGCAAAGACGAGCAACTGGGCAGGAATATTCTGAACTCATGCACGAATTTATGACTGCAGTCAAGCAAACTTACGGTGAAAAAGTCTTAATTCAGTTTGAAGACTTCGCGAACCACAATGCTTTTGATCTGCTTGAAAAATATAGATCAACACATCTGGTTTTCAACGACGATATTCAGGGAACGGCATCGGTTGTTCTTGCTGGACTAGTTGCAGCTTTGAAATTGGTTGGGGGAAACTTAGCTGACCACAAATTCTTATTCCTTGGTGCCGGCGAGGCGGGCACTGGAATTGCAGAGCTCATTGCACTTGAAACATCTAAACAGACAAATGCCCCATTGGATGAAGTGCGCAAGAATATTTGGTTGGTGGACTCAAAGGGATTGATTGTCAGTTCCCGTAAAGAATCACTCCAACATTTCAAGAAGCCGTGGGCTCATGAACACGAACCTGTTAAAAACCTTCTTGATGCTGTTAATAAAATTAAGCCAACAGTGCTTATTGGAACATCGGGACAAGGAAGTGCGTTTACCAAAGAGGTGGTTGAGGCGATGGCCTCTATTAACGAGAAACCTATTATTCTTTCTCTTTCCAACCCAACGTCACAGTCCGAATGTACTGCTGAAGAAGCTTATACGTGGACACAGGGACGTGCGATCTTTGCAAGTGGGAGCCCATTTTCGCCGGTTGAATATAAGGGGAAAGTGTTTGTGCCTGGCCAGGCAAATAATGCATACATATTCCCTGGGTTCGGCCTAGGTTTAATAATGTCTGGGACCATTCGTGTACATGACGACCTGCTTCTTGCTGCCTCTGAGGCATTGGCTGAACAAGTATCAGAAGAGAACTTTGAGAAGGGTTTGATATTCCCACCATTCACCAACATCAGAAAGATATCAGCTCACATAGCTGCCAAAGTTGCTGCTAAGGCTTATGAGCTTGGCTTGGCCACTCGCCTTCCACAGCCAAAAGATTTGGTGAAGTTTGCCGAGAGCTGTATGTATACCCCGGCCTACAGAAGCTACCGGTGA 2028 0.4502 MGNGVHSWHLLKQVASYNLFKQSRTLSRTSIPIIMISATRCTFLGCSGLGGSGNICGGQRRGYGPWRVTCMSPINDRNGSVVNVMETPLKEIKKEAVVEDVDDNPISGGGPRDVYGEDKATEDHFVTPWSVSVASGYTLLRDPHFNKGLAFTEKERDAHYLRGLLPPTTIPQETQVRKMIQHIRQYQVPLQRYMAMMDLQERNERLFYKLLIDHVEELLPIVYTPTVGEACQKYGDIFMRPQGLYISLKEKGRIQEVLRNWPEKNIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITIDVGTNNERLLNDELYIGLKQRRATGQEYSELMHEFMTAVKQTYGEKVLIQFEDFANHNAFDLLEKYRSTHLVFNDDIQGTASVVLAGLVAALKLVGGNLADHKFLFLGAGEAGTGIAELIALETSKQTNAPLDEVRKNIWLVDSKGLIVSSRKESLQHFKKPWAHEHEPVKNLLDAVNKIKPTVLIGTSGQGSAFTKEVVEAMASINEKPIILSLSNPTSQSECTAEEAYTWTQGRAIFASGSPFSPVEYKGKVFVPGQANNAYIFPGFGLGLIMSGTIRVHDDLLLAASEALAEQVSEENFEKGLIFPPFTNIRKISAHIAAKVAAKAYELGLATRLPQPKDLVKFAESCMYTPAYRSYR* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3549 675 PRINTS Malic enzyme signature 206 230 IPR001891 GO:0004470|GO:0004471
Mtr2g3549 675 PRINTS Malic enzyme signature 266 295 IPR001891 GO:0004470|GO:0004471
Mtr2g3549 675 PRINTS Malic enzyme signature 302 324 IPR001891 GO:0004470|GO:0004471
Mtr2g3549 675 PRINTS Malic enzyme signature 362 380 IPR001891 GO:0004470|GO:0004471
Mtr2g3549 675 PRINTS Malic enzyme signature 387 403 IPR001891 GO:0004470|GO:0004471
Mtr2g3549 675 PRINTS Malic enzyme signature 418 434 IPR001891 GO:0004470|GO:0004471
Mtr2g3549 675 PRINTS Malic enzyme signature 521 537 IPR001891 GO:0004470|GO:0004471
Mtr2g3549 675 SMART Malic_M_2 391 644 IPR012302 GO:0051287
Mtr2g3549 675 Gene3D - 389 675 - -
Mtr2g3549 675 SMART malic_2 200 381 IPR012301 GO:0004471
Mtr2g3549 675 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 391 674 IPR036291 -
Mtr2g3549 675 Pfam Malic enzyme, N-terminal domain 200 381 IPR012301 GO:0004471
Mtr2g3549 675 CDD NAD_bind_1_malic_enz 391 669 - -
Mtr2g3549 675 ProSitePatterns Malic enzymes signature. 387 403 IPR015884 GO:0004471
Mtr2g3549 675 PIRSF ME 92 675 IPR001891 GO:0004470|GO:0004471
Mtr2g3549 675 Pfam Malic enzyme, NAD binding domain 391 643 IPR012302 GO:0051287
Mtr2g3549 675 PANTHER MALIC ENZYME-RELATED 105 675 - -
Mtr2g3549 675 PANTHER NADP-DEPENDENT MALIC ENZYME 4, CHLOROPLASTIC 105 675 - -
Mtr2g3549 675 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 118 390 IPR046346 -
Mtr2g3549 675 Gene3D - 134 388 IPR037062 GO:0004471
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3549 Mtr-Chr2 49546362 49551472 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3549 K00029 - gmx:100791514 1103.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g0386 8 4405599 4411023 Mtr2g3549 2 49546362 49551472 ECH
Mtr8g3679 8 47338604 47343263 Mtr2g3549 2 49546362 49551472 ECH
Mtr2g3549 2 49546362 49551472 Mtr2g3549 2 49546362 49551472 ECH
Mtr2g3549 2 49546362 49551472 Mtr3g4110 3 54887725 54892714 ECH
Mtr2g3549 2 49546362 49551472 Mtr8g0386 8 4405599 4411023 PCT