Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4110 ATGGCAACTGAGGATTTTGTGAACGGTGTCGGTGGTGGTGTTAAGGACCTCTATGGTGAGGATAGTGCTACAGAGGATCAACTTATCACACCATGGAATTTCTCTGTTGCTAGTGGATGCACTTTGCTGAGAGATCCACGCTACAACAAAGGACTTGCCTTCACTGAGAAAGAAAGAGATGCTCATTATGTTCGTGGCCTTTTGCCACCAGCTGTCTTCACTCAAGAGCTGCAGGAAAAGAGGTTGATGCACAATCTTCGCCAGTATGATGTTCCTCTTCACAAGTACATAGCCTTGATGGATCTTCAGGAGAGGAATGAAAGGCTGTTTTACAAGCTTATGATCGATAATGTCGAAGAATTGCTACCTGTTGTTTACACTCCAACAGTTGGAGAAGCCTGCCAGAAATATGGAAGCATTTATAGACGTCCTCAGGGTCTATATATAAGTTTGAAGGAGAAAGGCAAAATCCTTGAGGTACTTAAAAACTGGCCAGAAAAGACTATTCAAGTTATTGTTGTGACTGATGGTGAGCGAATATTAGGACTAGGCGATCTTGGTTGCCAGGGAATGGGAATTCCTGTTGGGAAACTTTCTCTCTATACTGCATTAGGAGGTGTTCGCCCTTCTTCATGTTTGCCTATAACCATTGATGTTGGCACAAACAATGAGAAGTTGTTGAATGATGAATTCTACATTGGCCTTAGACAGAAGCGAGCAACTGGGAAGGAATATGCGGAGCTTCTAGAAGAGTTTATGCATGCAGTTAAGCAGAACTATGGGGAGAAAGTTCTTGTACAGTTTGAAGATTTTGCCAATCATAATGCTTTCGATCTTCTGGATAAATACAGCTCATCTCATCTTGTTTTCAATGATGATATACAGGGTACAGCATCTGTGGTGTTAGCAGGATTGCTTGCTTCCCTTAAATTAGTTGGAGGAACTTTAGCTGACCACACGTTCTTATTCTTAGGAGCTGGAGAGGCTGGAACTGGTATAGCAGAACTGATAGCTCTTGAGATTTCAAAACAGACAAAAGCTCCAGTTGAAGAGACTCGCAAAAAGATCTGGCTTGTTGACTCCAAGGGTCTTATTGTTAGCTCTCGTCTGCAATCCCTTCAACACTTCAAAAAGCCTTGGGCCCATGAGCATGAACCTGTGAAGGAGCTTCTAAATGCTGTCAAGGCAATCAAGCCAACCGTTTTGATTGGATCCTCTGGAGTAGGAAAGACATTTACCAAGGAAGTTGTTGAAGCCATGGCATCCTTGAATGAGAAACCACTCATTCTTGCACTTTCCAACCCAACATCACAATCTGAGTGCACAGCTGAAGAAGCTTATACATGGAGCAAGGGTAAAGCAATTTTTGCTAGTGGAAGCCCATTTGATCCTGTTGAATATGAAGGAAAAGTTTTTGTTCCTGGACAGTCCAACAATGCTTACATTTTTCCCGGATTTGGTTTGGGTTTGATCATCTCTGGTGCAATCCGCGTGCGTGATGAGATGCTCTTGGCAGCCTCTGAAGCTTTGGCTGCACAAGTATCACAGGAGAACTATGATAAGGGACTGATATACCCTCCATTCACAAATATCAGAAAGATATCAGCCAACATTGCTGCTAGTGTTGCAGCTAAGACATACGAACTTGGTCTGGCTTCTCATTTACCTCGACCAAAGGATCTTGTCAAATACGCAGAAAGTTGCATGTACAGCCCAGGCTATCGAAGCTACCGTTGA 1737 0.4318 MATEDFVNGVGGGVKDLYGEDSATEDQLITPWNFSVASGCTLLRDPRYNKGLAFTEKERDAHYVRGLLPPAVFTQELQEKRLMHNLRQYDVPLHKYIALMDLQERNERLFYKLMIDNVEELLPVVYTPTVGEACQKYGSIYRRPQGLYISLKEKGKILEVLKNWPEKTIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSSCLPITIDVGTNNEKLLNDEFYIGLRQKRATGKEYAELLEEFMHAVKQNYGEKVLVQFEDFANHNAFDLLDKYSSSHLVFNDDIQGTASVVLAGLLASLKLVGGTLADHTFLFLGAGEAGTGIAELIALEISKQTKAPVEETRKKIWLVDSKGLIVSSRLQSLQHFKKPWAHEHEPVKELLNAVKAIKPTVLIGSSGVGKTFTKEVVEAMASLNEKPLILALSNPTSQSECTAEEAYTWSKGKAIFASGSPFDPVEYEGKVFVPGQSNNAYIFPGFGLGLIISGAIRVRDEMLLAASEALAAQVSQENYDKGLIYPPFTNIRKISANIAASVAAKTYELGLASHLPRPKDLVKYAESCMYSPGYRSYR* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4110 578 Pfam Malic enzyme, NAD binding domain 294 545 IPR012302 GO:0051287
Mtr3g4110 578 Pfam Malic enzyme, N-terminal domain 103 283 IPR012301 GO:0004471
Mtr3g4110 578 SMART malic_2 103 284 IPR012301 GO:0004471
Mtr3g4110 578 PRINTS Malic enzyme signature 109 133 IPR001891 GO:0004470|GO:0004471
Mtr3g4110 578 PRINTS Malic enzyme signature 169 198 IPR001891 GO:0004470|GO:0004471
Mtr3g4110 578 PRINTS Malic enzyme signature 205 227 IPR001891 GO:0004470|GO:0004471
Mtr3g4110 578 PRINTS Malic enzyme signature 265 283 IPR001891 GO:0004470|GO:0004471
Mtr3g4110 578 PRINTS Malic enzyme signature 290 306 IPR001891 GO:0004470|GO:0004471
Mtr3g4110 578 PRINTS Malic enzyme signature 321 337 IPR001891 GO:0004470|GO:0004471
Mtr3g4110 578 PRINTS Malic enzyme signature 424 440 IPR001891 GO:0004470|GO:0004471
Mtr3g4110 578 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 294 577 IPR036291 -
Mtr3g4110 578 SMART Malic_M_2 294 547 IPR012302 GO:0051287
Mtr3g4110 578 CDD NAD_bind_1_malic_enz 294 572 - -
Mtr3g4110 578 PANTHER MALIC ENZYME 8 578 - -
Mtr3g4110 578 PANTHER MALIC ENZYME-RELATED 8 578 - -
Mtr3g4110 578 Gene3D - 37 291 IPR037062 GO:0004471
Mtr3g4110 578 PIRSF ME 15 578 IPR001891 GO:0004470|GO:0004471
Mtr3g4110 578 ProSitePatterns Malic enzymes signature. 290 306 IPR015884 GO:0004471
Mtr3g4110 578 Gene3D - 292 578 - -
Mtr3g4110 578 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 22 293 IPR046346 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4110 Mtr-Chr3 54887725 54892714 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4110 K00029 - gmx:100818219 1075.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4110 3 54887725 54892714 Mtr3g4110 3 54887725 54892714 ECH
Mtr8g3679 8 47338604 47343263 Mtr3g4110 3 54887725 54892714 ECH
Mtr8g0386 8 4405599 4411023 Mtr3g4110 3 54887725 54892714 ECH
Mtr2g3549 2 49546362 49551472 Mtr3g4110 3 54887725 54892714 ECH