Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g2404 ATGGCAGCTTCAACTCAATTTGCTAGAACTCTTCTCTTTCTCGTTTTCTTTTTCTTTCATTCCTTAAGAGGTTTAAATTCAGCCACATTTACAATTGTAAACAAGTGCAGCTATCCTGTTTGGCCGGGAATTTTGTCTGGTGCCGGAACGGCACAACTAGCAACGACAGGCTTCGCCCTACAACCGGGCGAATCCAATGCCGTCACCATGCCCACATCTTGGTCCGGCCGCATATGGGGCCGAACACTATGCTCAACCGACCCCTCCGGAAAATTCTCATGCATCACTGGAGACTGCGGCTCCTCTAAAGTAGAATGCACTGGCAGCGGCGCCATCCCTCCAGCGACGCTCGCGGAGTTCACATTAAACGGTGCTAATGGACTAGATTTCTACGACGTCAGCCTAGTCGACGGTTACAACCTTCCCATAACAGTGGAACCAAGTGGCGGCAGTGGAAACTGCACGACTACGGGCTGTTTAGTAGACTTAAATGGCGCGTGTCCGACAGAACTAAAGGTGAAAATTGCGGCGGAAGAAGAAGGGAGTGATGAAAAGAGCGTGGCATGTAAAAGCGCGTGCGAAGCCTTTGGTGATCCATTGTATTGTTGCAATGGCGCTTATGGAACTCCGCAGACTTGTAAGCCAAGTTCATACTCGCAGTTCTTCAAGAGCGCGTGTCCACGCGCTTATAGCTATGCTTATGATGATGGAACTAGCACCTTCACTTGTTCCTCTGCAGATTACCTCATTACTTTCTGTTCTACACATTCCAAAGGTTCGATCAAGTCAGGGACCGGAAAACTCCCGTTTGGAGTGGACATTTGGGCAGGACACGCCCATGGCCATGCTGATAAGTCAACCAAGGGGATGTCTCTAGTTGTGGCAGCAGTTTTCATGACAATTTGGTGGCAGCTCAGTTAG 921 0.4951 MAASTQFARTLLFLVFFFFHSLRGLNSATFTIVNKCSYPVWPGILSGAGTAQLATTGFALQPGESNAVTMPTSWSGRIWGRTLCSTDPSGKFSCITGDCGSSKVECTGSGAIPPATLAEFTLNGANGLDFYDVSLVDGYNLPITVEPSGGSGNCTTTGCLVDLNGACPTELKVKIAAEEEGSDEKSVACKSACEAFGDPLYCCNGAYGTPQTCKPSSYSQFFKSACPRAYSYAYDDGTSTFTCSSADYLITFCSTHSKGSIKSGTGKLPFGVDIWAGHAHGHADKSTKGMSLVVAAVFMTIWWQLS* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g2404 306 SUPERFAMILY Osmotin, thaumatin-like protein 28 253 IPR037176 -
Mtr8g2404 306 PRINTS Pathogenesis-related protein signature 29 41 IPR001938 -
Mtr8g2404 306 PRINTS Pathogenesis-related protein signature 77 88 IPR001938 -
Mtr8g2404 306 PRINTS Pathogenesis-related protein signature 129 145 IPR001938 -
Mtr8g2404 306 PRINTS Pathogenesis-related protein signature 244 253 IPR001938 -
Mtr8g2404 306 ProSiteProfiles Thaumatin family profile. 27 256 IPR001938 -
Mtr8g2404 306 CDD TLP-PA 29 253 - -
Mtr8g2404 306 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 11 270 - -
Mtr8g2404 306 SMART tha2 30 254 IPR001938 -
Mtr8g2404 306 PANTHER OS03G0233200 PROTEIN 11 270 IPR001938 -
Mtr8g2404 306 Pfam Thaumatin family 34 253 IPR001938 -
Mtr8g2404 306 Gene3D Thaumatin 28 253 IPR037176 -
Mtr8g2404 306 PIRSF PR5 1 287 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g2404 Mtr-Chr8 34412506 34414771 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr8g2404 7 253 Receptor kinase-like Gene Family AT5G38280 52.800 6.52e-86 269
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g2404 - - gmx:100809419 456.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0885 5 8817304 8819550 Mtr8g2404 8 34412506 34414771 ECH
Mtr3g4274 3 56597108 56601575 Mtr8g2404 8 34412506 34414771 ECH
Mtr8g2404 8 34412506 34414771 Mtr8g2404 8 34412506 34414771 ECH
Mtr5g0885 5 8817304 8819550 Mtr8g2404 8 34412506 34414771 PCT