Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g4274 ATGGATCAACTAAGTACTAAATTATTTTCAATTTTCCTTATCATACTTAATCTTTCAATATCAGGGGTATTATCAACAACATTCACACTCGTTAACAAATGCAACTACACGGTATGGCCGGGAATTCTCTCCAACGCCGGCGTTGCACCGCTTCCAACCACCGGTTTCGTTCTTCAATCCGGCGACTCCAAATCAATCACCCCACCCGCTTCCTGGGGAGGCCGTTTCTGGGGCCGTACTGTCTGTTCCCAAGACTCCACCGGAAAATTCTCCTGTCTCACCGGCGATTGTAACTCCGGCAAAGTCGAATGCTCTGGCAACGGCGCAACACCACCAGCTACCTTAGCGGAATTCACTCTCGATGGATCCGGTGGACTCGATTTCTTCGACGTGAGTTTAGTTGACGGTTACAACGTTCCAATGCTTGTGGTTCCACAAGGTGGCTCCGGTGATAACTGTACGAATACCGGTTGTATTAGGGATTTGCTCGGTGCGTGTCCTTCAGAGCTTAAGGTTACGACCGTGGATGGGAAAGAGAGTGTGGCGTGTAAAAGTGCTTGTGAAGCGTTTGGAACGGCGCAGTATTGTTGCAGCGGCGCGTATGGTTCACCCAACACTTGCAAACCTTCGAGTTATTCTGAGTTATTTAAAAGTGCTTGCCCACGCGCGTATAGCTACGCGTACGACGATAAGACAAGCACGTTCACATGTGCTTCTGCGGCTGAATACACAATCACTTTTTGCCCCTCCACTAACAACAGCCCAAGTCAAAAGGCGTGGCAGGGACAAAATCCGAAATCAGATGGCAGCGACTCATCATCATCGCCTCAGCTTAACAACGGCTCAAACTCAATGGTGTACGTTGGTGGCTTTGATCAGAGTGAAATATCGTGGGCCACGTGTATCAATGTGTGGGAATCCCAAACTATTCTTACCATCACAACGGCTATGTGGCTTCTGTGTCGGCTTTTCCATTTCTAA 981 0.4862 MDQLSTKLFSIFLIILNLSISGVLSTTFTLVNKCNYTVWPGILSNAGVAPLPTTGFVLQSGDSKSITPPASWGGRFWGRTVCSQDSTGKFSCLTGDCNSGKVECSGNGATPPATLAEFTLDGSGGLDFFDVSLVDGYNVPMLVVPQGGSGDNCTNTGCIRDLLGACPSELKVTTVDGKESVACKSACEAFGTAQYCCSGAYGSPNTCKPSSYSELFKSACPRAYSYAYDDKTSTFTCASAAEYTITFCPSTNNSPSQKAWQGQNPKSDGSDSSSSPQLNNGSNSMVYVGGFDQSEISWATCINVWESQTILTITTAMWLLCRLFHF* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g4274 326 PANTHER BNAA02G17480D PROTEIN 9 275 - -
Mtr3g4274 326 Pfam Thaumatin family 32 249 IPR001938 -
Mtr3g4274 326 SUPERFAMILY Osmotin, thaumatin-like protein 26 250 IPR037176 -
Mtr3g4274 326 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Mtr3g4274 326 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Mtr3g4274 326 PRINTS Pathogenesis-related protein signature 127 143 IPR001938 -
Mtr3g4274 326 PRINTS Pathogenesis-related protein signature 239 248 IPR001938 -
Mtr3g4274 326 PANTHER OS03G0233200 PROTEIN 9 275 IPR001938 -
Mtr3g4274 326 SMART tha2 28 249 IPR001938 -
Mtr3g4274 326 Gene3D Thaumatin 26 249 IPR037176 -
Mtr3g4274 326 MobiDBLite consensus disorder prediction 253 278 - -
Mtr3g4274 326 CDD TLP-PA 27 248 - -
Mtr3g4274 326 ProSitePatterns Thaumatin family signature. 88 104 IPR017949 -
Mtr3g4274 326 ProSiteProfiles Thaumatin family profile. 25 249 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g4274 Mtr-Chr3 56597108 56601575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g4274 11 267 Receptor kinase-like Gene Family AT5G38280 52.672 1.05e-93 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g4274 - - gmx:100780102 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g4274 3 56597108 56601575 Mtr5g0885 5 8817304 8819550 ECH
Mtr3g4274 3 56597108 56601575 Mtr8g2404 8 34412506 34414771 ECH
Mtr3g4274 3 56597108 56601575 Mtr3g4274 3 56597108 56601575 ECH