Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0885 ATGGCTTCTTCTACTCAATTTGTCATCACTTTGGTTGCCCTAATTCTCTACCAACTCGTAATAGGTTCATATTCAACAACATTCACAATTGTGAACAATTGCGGTTACACAGTTTGGCCGGGAATTTTATCCGGCGCCGGGACAGAACCGTTCTCCACCACCGGCTTCGTTCTCCAACCAGGCGAGTCCAATGCTCTCGCTGTACCACCATCATGGTCCGGCCGTGTATGGGGACGAACACTCTGCTCCCAAGACCCCACTGGAAAATTCTCATGCATCACCGGCGACTGTGATTCCTCCACCATCGAATGTGCCGGAAGAAACGCTATACCACCGGCAACATTAGCAGAATTCACACTCAACGGTTCCGGAGGACTTGATTTCTTCGACGTTAGTCTCGTCGACGGTTACAATCTCCCAATATTAATCGAACCACACGGTGAAACCGGCGGCGGAAACTGCACGGCAACGGGTTGCTCCGTCGACTTAAACGCGGCGTGTCCGATGGAGTTGAAAGTGATAAGTAGTAATAACGGCGGTGAAGAGAGCGTGGCGTGTAAAAGCGCGTGTGAAGCGTTTGGGGATCCGCAATATTGCTGCAGTGGCGCTTATGGTTCCCCGGATACGTGTAAACCAAGTTCCTACTCGCAGTTTTTTAAGAGTGCGTGTCCACGCGCTTATAGTTACGCTTATGATGATGGAACTAGCACTTTCACTTGTGCTTCTGCTGATTATACCATCACTTTTTGCCCCACACCCTCCGCAAGTTCAATCAAATCTGGGAATGGAAAATATCCTTTGCCGGCTACTGACGTGTCTGGTGTTCGACATGTGGATCAGAGAGTCAACAACGTTGTTATTGCTTTTGTTTTGATGGCTTTGGTGGTTGAACGGTTGTGGTAA 903 0.4906 MASSTQFVITLVALILYQLVIGSYSTTFTIVNNCGYTVWPGILSGAGTEPFSTTGFVLQPGESNALAVPPSWSGRVWGRTLCSQDPTGKFSCITGDCDSSTIECAGRNAIPPATLAEFTLNGSGGLDFFDVSLVDGYNLPILIEPHGETGGGNCTATGCSVDLNAACPMELKVISSNNGGEESVACKSACEAFGDPQYCCSGAYGSPDTCKPSSYSQFFKSACPRAYSYAYDDGTSTFTCASADYTITFCPTPSASSIKSGNGKYPLPATDVSGVRHVDQRVNNVVIAFVLMALVVERLW* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0885 300 PRINTS Pathogenesis-related protein signature 27 39 IPR001938 -
Mtr5g0885 300 PRINTS Pathogenesis-related protein signature 75 86 IPR001938 -
Mtr5g0885 300 PRINTS Pathogenesis-related protein signature 127 143 IPR001938 -
Mtr5g0885 300 PRINTS Pathogenesis-related protein signature 241 250 IPR001938 -
Mtr5g0885 300 ProSiteProfiles Thaumatin family profile. 25 251 IPR001938 -
Mtr5g0885 300 PANTHER OS03G0233200 PROTEIN 14 269 IPR001938 -
Mtr5g0885 300 CDD TLP-PA 27 250 - -
Mtr5g0885 300 SUPERFAMILY Osmotin, thaumatin-like protein 26 251 IPR037176 -
Mtr5g0885 300 Pfam Thaumatin family 32 251 IPR001938 -
Mtr5g0885 300 Gene3D Thaumatin 26 251 IPR037176 -
Mtr5g0885 300 PANTHER PATHOGENESIS-RELATED THAUMATIN SUPERFAMILY PROTEIN 14 269 - -
Mtr5g0885 300 SMART tha2 28 251 IPR001938 -
Mtr5g0885 300 PIRSF PR5 1 292 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0885 Mtr-Chr5 8817304 8819550 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0885 7 256 Receptor kinase-like Gene Family AT5G38280 50.397 7.58e-84 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0885 - - gmx:100806478 470.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0885 5 8817304 8819550 Mtr8g2404 8 34412506 34414771 ECH
Mtr3g4274 3 56597108 56601575 Mtr5g0885 5 8817304 8819550 ECH
Mtr5g0885 5 8817304 8819550 Mtr5g0885 5 8817304 8819550 ECH
Mtr5g0885 5 8817304 8819550 Mtr8g2404 8 34412506 34414771 PCT