Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1971 ATGGCAGGAGAGTCATACGAGGAGGCCATTGCAGAGTTGACGAAGCTTCTAAGCGAGAAAGCTGACCTCGGACATGTTGCCGCCGCAAAGATCAAGCAGTTGACGACGGAGCTGGTTGCTGTTGGGTCGGATGGTTTTAACCCGGATGAAAGAATTCGAAGTGGGTTCGAGTATTTCAAGAAAGAAAAGTTCTTGAAAAAACCAGAACTGTATGGTGAACTTGCCAAAGGCCAGAGCCCAAAGTTTCTGGTTTTCGCCTGCTCAGACTCAAGAGTTTGCCCATCTTATGTTCTAAATTTTCAACCTGGTGAAGCCTTTGTGGTCCGTAACATTGCCAACATGGTTCCACCATATGACAAGAGCAAGTATTCAGGAACAGGTGCTGCCATTGAATATGCAGTCGTACATTTAAAGGTGGAGAATATTGTGGTTATTGGACACAGTTGCTGTGGAGGTATAAAGGGTCTCATGTCCATCCCAGATGATGGGACCACCGCAAGTGACTTCATAGAGCAGTGGGTCCAAATTTGTAATCCAGCAAAGTCAAAAGTTAAAGAAGCAAGCAACTCAGATTTCTCAGAGCAGTGTACCAACTTGGAGAAGGAAGCTGTTAATGTATCTCTGGGGAACTTACTGACTTATCCATTCGTGAGAGATGCTGTCGTGAAGAAAACAATTGCTTTGAAAGGTGCACATTACGATTTTGTTAACGGAGCATTTGAACTGTGGGATATAGACTTCAAAATTTCACCCTCAGTGTCCTTTTAA 768 0.4414 MAGESYEEAIAELTKLLSEKADLGHVAAAKIKQLTTELVAVGSDGFNPDERIRSGFEYFKKEKFLKKPELYGELAKGQSPKFLVFACSDSRVCPSYVLNFQPGEAFVVRNIANMVPPYDKSKYSGTGAAIEYAVVHLKVENIVVIGHSCCGGIKGLMSIPDDGTTASDFIEQWVQICNPAKSKVKEASNSDFSEQCTNLEKEAVNVSLGNLLTYPFVRDAVVKKTIALKGAHYDFVNGAFELWDIDFKISPSVSF* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1971 255 Gene3D Carbonic anhydrase 47 255 IPR036874 GO:0004089|GO:0008270
Mtr8g1971 255 SUPERFAMILY beta-carbonic anhydrase, cab 43 250 IPR036874 GO:0004089|GO:0008270
Mtr8g1971 255 CDD beta_CA_cladeB 55 243 IPR045066 GO:0004089|GO:0008270
Mtr8g1971 255 PANTHER CARBONIC ANHYDRASE 1 255 - -
Mtr8g1971 255 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 131 151 IPR015892 GO:0004089|GO:0008270|GO:0015976
Mtr8g1971 255 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 87 94 IPR015892 GO:0004089|GO:0008270|GO:0015976
Mtr8g1971 255 PANTHER CARBONIC ANHYDRASE 1 255 IPR001765 GO:0004089|GO:0008270
Mtr8g1971 255 Pfam Carbonic anhydrase 83 239 IPR001765 GO:0004089|GO:0008270
Mtr8g1971 255 SMART Pro_CA_2 75 244 IPR001765 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1971 Mtr-Chr8 29622716 29631199 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1971 K01673 - gmx:100803945 424.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1971 8 29622716 29631199 Mtr8g1971 8 29622716 29631199 ECH
Mtr8g1971 8 29622716 29631199 Mtr3g2464 3 38586322 38588622 ECH
Mtr8g1971 8 29622716 29631199 Mtr6g0114 6 1352106 1360084 ECH
Mtr5g1407 5 14732175 14740803 Mtr8g1971 8 29622716 29631199 PCT