Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g1407 ATGGCTGGGGCATTCAAAAAGTGCATGATGCTGTGTTGCACAAGCAAGATTGTCTCGAAGGAAGACATGGCTGGAGAAACATTCGAGGATTCCATCGCAACTCTGACCAGACTTCTCAAGGAGAAAGCTGAGCTTGGTGATATCGCCGCCGTGAAGATCAAGGAGCTGACGGCGGAGTTAGAGGCCAACGGTTCAAAGCCGTTTAACCCGGATGAGAGGATCCGATCCGGGTTTGTTAGTTTCAAGACTGAGAAATTCTTGAAGAATCCTGAGCTGTACGGTGAACTTGCCAAAGGCCAGAGCCCAAAGTTTATGGTGTTTGCTTGCTCAGATTCTAGAGTATGCCCTTCCCACATTTTGGATTTCCAACCGGGTGAAGCCTTTGTGGTCCGTAACATCGCCAACATGGTTCCACCATTTGATAAGACCAAGTATTCGGGAGCAGGGGCAGCCATTGAATATGCGGTCTTACATTTAAAGGTGGAGAATATTGTAGTTATTGGACACAGCTGCTGTGGAGGCATAAAGGGGCTCATGTCTATCCCAGATGATGGGACCACCGCAAGTGATTTCATTGAGCAATGGGTCCAAATATGTAATCCAGCAAGGTCCAAGGTTAAATTAGAAACAAGTAGCTTAAGCTTTGCAGAGCAGTGCACAAACTGTGAAAAGGAAGCTGTGAATGTATCGCTTGGGAACTTATTGACTTATCCATTTGTGAGAGATGGTGTTGTGAAGAAAAGCCTTGCTTTGAAAGGAGCACATTACAATTTTGTTAATGGCACATTTGAGCTGTGGGATTTGAATTTCAACCTTTTACCCTCTGTATCCATTTAA 837 0.4516 MAGAFKKCMMLCCTSKIVSKEDMAGETFEDSIATLTRLLKEKAELGDIAAVKIKELTAELEANGSKPFNPDERIRSGFVSFKTEKFLKNPELYGELAKGQSPKFMVFACSDSRVCPSHILDFQPGEAFVVRNIANMVPPFDKTKYSGAGAAIEYAVLHLKVENIVVIGHSCCGGIKGLMSIPDDGTTASDFIEQWVQICNPARSKVKLETSSLSFAEQCTNCEKEAVNVSLGNLLTYPFVRDGVVKKSLALKGAHYNFVNGTFELWDLNFNLLPSVSI* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g1407 278 CDD beta_CA_cladeB 77 266 IPR045066 GO:0004089|GO:0008270
Mtr5g1407 278 Pfam Carbonic anhydrase 105 262 IPR001765 GO:0004089|GO:0008270
Mtr5g1407 278 SMART Pro_CA_2 97 267 IPR001765 GO:0004089|GO:0008270
Mtr5g1407 278 PANTHER CARBONIC ANHYDRASE 23 278 - -
Mtr5g1407 278 PANTHER CARBONIC ANHYDRASE 23 278 IPR001765 GO:0004089|GO:0008270
Mtr5g1407 278 SUPERFAMILY beta-carbonic anhydrase, cab 65 274 IPR036874 GO:0004089|GO:0008270
Mtr5g1407 278 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 153 173 IPR015892 GO:0004089|GO:0008270|GO:0015976
Mtr5g1407 278 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 109 116 IPR015892 GO:0004089|GO:0008270|GO:0015976
Mtr5g1407 278 Gene3D Carbonic anhydrase 62 278 IPR036874 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g1407 Mtr-Chr5 14732175 14740803 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g1407 K01673 - gmx:100803945 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g1407 5 14732175 14740803 Mtr5g1407 5 14732175 14740803 ECH
Mtr5g1407 5 14732175 14740803 Mtr3g2464 3 38586322 38588622 ECH
Mtr5g1407 5 14732175 14740803 Mtr6g0114 6 1352106 1360084 ECH
Mtr5g1407 5 14732175 14740803 Mtr8g1971 8 29622716 29631199 PCT