Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr6g0114 ATGTCTACCTCTTCCATAAACGGCTTTAGTCTCTCTTCTTTGTCCCCTACAAAAACTTCTATTAAAAAAGTTACATTGAGACCTATTGTTTCTGCATCTCTTAACTCTTCTTCTTCTTCCTCTTCCACTTCTAACTTCCCTTCTCTTATTCAAGACAAGCCTGTTTTTGCTTCATCTTCTTCTCCTATCATCACCCCAGTTTTGAGAGAAGAAATGGGAAAGGGCTATGATGAAGCTATTGAAGAACTCCAAAAATTGTTGAGGGAGAAGACTGAATTGAAAGCCACAGCAGCTGAAAAGGTTGAGCAAATTACAGCTCAGCTAGGAACAACAGCATCAGCTGATGGTGTTCCAACATCTGATCAAGCCTCAGAGAGGATCAAAACTGGTTTCCTTCACTTCAAGAAAGAGAAATATGACACAAAACCAGCTTTGTATGGTGAACTTGCCAAAGGCCAAGCCCCCCCGTTTATGGTGTTTGCATGCTCAGACTCAAGAGTCTGCCCATCTCATGTGCTAGACTTCCAGCCAGGAGAAGCTTTTGTGGTCAGAAATGTTGCTAACATGGTTCCACCATATGACCAGGCAAAATATGCTGGAACTGGATCTGCAATTGAGTATGCTGTTCTGCATCTCAAGGTTTCCAACATTGTGGTCATTGGACACAGTGCTTGTGGTGGTATTAAGGGGCTTTTGTCTTTTCCATTTGATGGAGCCTACTCCACTGATTTCATTGAGGAGTGGGTCAAAATTGGTTTACCTGCAAAGGCAAAGGTGAAGGCAAAGCATGGAGATGCACCTTTTGGAGAGCTATGCACACACTGTGAGAAGGAAGCTGTGAATGTTTCTCTTGGAAACCTTCTAACCTACCCATTTGTGAGAGAGGGATTGGTGAACAAAACATTGGCACTAAAAGGAGGATACTATGACTTTGTGAAAGGATCTTTTGAGCTTTGGGGACTTGAATTTGGCCTTTCTTCAACTTTCTCCGTAAAAGATGTGGCCACGGTTCTACATTGGAAGCTATAA 1029 0.4257 MSTSSINGFSLSSLSPTKTSIKKVTLRPIVSASLNSSSSSSSTSNFPSLIQDKPVFASSSSPIITPVLREEMGKGYDEAIEELQKLLREKTELKATAAEKVEQITAQLGTTASADGVPTSDQASERIKTGFLHFKKEKYDTKPALYGELAKGQAPPFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANMVPPYDQAKYAGTGSAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGAYSTDFIEEWVKIGLPAKAKVKAKHGDAPFGELCTHCEKEAVNVSLGNLLTYPFVREGLVNKTLALKGGYYDFVKGSFELWGLEFGLSSTFSVKDVATVLHWKL* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr6g0114 342 SMART Pro_CA_2 150 320 IPR001765 GO:0004089|GO:0008270
Mtr6g0114 342 Pfam Carbonic anhydrase 158 315 IPR001765 GO:0004089|GO:0008270
Mtr6g0114 342 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 206 226 IPR015892 GO:0004089|GO:0008270|GO:0015976
Mtr6g0114 342 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 162 169 IPR015892 GO:0004089|GO:0008270|GO:0015976
Mtr6g0114 342 Coils Coil 69 103 - -
Mtr6g0114 342 CDD beta_CA_cladeB 130 319 IPR045066 GO:0004089|GO:0008270
Mtr6g0114 342 Gene3D Carbonic anhydrase 111 331 IPR036874 GO:0004089|GO:0008270
Mtr6g0114 342 SUPERFAMILY beta-carbonic anhydrase, cab 123 326 IPR036874 GO:0004089|GO:0008270
Mtr6g0114 342 PANTHER BETA CARBONIC ANHYDRASE 2, CHLOROPLASTIC 1 331 - -
Mtr6g0114 342 PANTHER CARBONIC ANHYDRASE 1 331 IPR001765 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr6g0114 Mtr-Chr6 1352106 1360084 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr6g0114 K01673 - gmx:100500448 532.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr6g0114 6 1352106 1360084 Mtr3g2465 3 38599559 38601429 ECH
Mtr6g0114 6 1352106 1360084 Mtr6g0114 6 1352106 1360084 ECH
Mtr5g1407 5 14732175 14740803 Mtr6g0114 6 1352106 1360084 ECH
Mtr8g1971 8 29622716 29631199 Mtr6g0114 6 1352106 1360084 ECH