Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr8g1033 ATGGGTGCTAATTTTTCCTCATGTGTATGTGATGGAGATGAGGATTGTAGTATGAGGCCAAGGCTTGGGGATATACCAGAGAGTTGTGTGGCATTGGTGTTGATGTATTTGGATCCACCGGATATATGTAAGCTAGCACGATTGAATAGGGCGTTTCGTGATGCTTCTTTTGCCGATTTTGTTTGGGAATCGAAGTTGCCTTTGAATTATGAGTTTATCATGGGAAAAGCTTTGGAGGATGATACTACTAGTTCTAGTTCTGGTGCTGAATTAGGGAAGAGGGATATTTATGCAAGGCTTTGTAAGCCTAATTTGTTTGACAATGGAACCAAGGAAATTTGGCTAGATAAGAGGACTGGTGGGGTTTGTTTGGCAATTTCCTCCAAAGCGTTAAGGATTACAGGGATAGATGATCGCAGATATTGGAATCACATTTCAACTGAAGAGTCAAGGTTCCATACAGTTGCTTATCTTCATCAAATATGGTGGCTTGAAGTGGAAGGAGATATTGATTTCCAATTTCCAGTAGGGACATACAGCGTGTACTTCAGACTTCACCTTGGCAGGTCATCCAAGAAGCTTGGACGACGAGTTTGCAAGACCGAGCACATCCATGGCTGGGATATTAAACCTGCAAAGTTTCAGCTGACGACTTCTGATGGTCAACGCGCTGTCTCCCATACTCATTTGGATAATCCAGGGCACTGGATCCTCTACCATGTAGGAAACTTTGTTTCTAAGAATTCTAATGATTTGATGAAGGTCAAGTTTTCATTGTCTCAAATAGATTGCACTCATACAAAGGGTGGTCTGTGTGTTGACTCTGTGCTTATATGCAATAGTAGCAATGTAAAAAAAGAAGCGTAA 867 0.4152 MGANFSSCVCDGDEDCSMRPRLGDIPESCVALVLMYLDPPDICKLARLNRAFRDASFADFVWESKLPLNYEFIMGKALEDDTTSSSSGAELGKRDIYARLCKPNLFDNGTKEIWLDKRTGGVCLAISSKALRITGIDDRRYWNHISTEESRFHTVAYLHQIWWLEVEGDIDFQFPVGTYSVYFRLHLGRSSKKLGRRVCKTEHIHGWDIKPAKFQLTTSDGQRAVSHTHLDNPGHWILYHVGNFVSKNSNDLMKVKFSLSQIDCTHTKGGLCVDSVLICNSSNVKKEA* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr8g1033 288 PANTHER F-BOX PROTEIN PP2-A13 1 286 - -
Mtr8g1033 288 SUPERFAMILY F-box domain 12 73 IPR036047 GO:0005515
Mtr8g1033 288 ProSiteProfiles F-box domain profile. 19 65 IPR001810 GO:0005515
Mtr8g1033 288 Pfam Phloem protein 2 122 278 IPR025886 -
Mtr8g1033 288 PANTHER F-BOX PROTEIN PP2-A15 1 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr8g1033 Mtr-Chr8 12509672 12513247 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr8g1033 - - gmx:100789493 494.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g1033 8 12509672 12513247 Mtr8g1033 8 12509672 12513247 ECH
Mtr5g0321 5 2988419 2991835 Mtr8g1033 8 12509672 12513247 ECH
Mtr4g3677 4 50537904 50540141 Mtr8g1033 8 12509672 12513247 ECH