Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3677 ATGGGTATCTTATTCTCAATTTCATCCCAATCATCATCATCACCAAATCCAAGTTTAGGAGAATTACCAGAAAGTTGCATAGCTGTTATAATGGAATACATGGATCCTCCTCAGATTTGTAAATTAGCTTCTCTCAACCGTGCTTTTCATGGTGCTTCTTTGGCTGATTTTGTTTGGGAATCCAAACTTCCCTCTAATTATCATGTCATCATTCAAAAAATCTTTGATGGTTCTTCTTTTCCTTCTCATTTAGGGAAAAGAGGGATTTATTCAAGACTTTGTTCCCTCAATACTTTTGATGAAGGCACCAAGAAAGTTTGGTTGGATAGAAGCATGGGTAAGGTGTGTTTGTCTGTATCGGCTAAAGGGTTGTCAATAACTGGGATTGATGATCGGAGATATTGGAACCATGTTCCCACTGAAGAATCAAGATTCAGTAGTGTTGCGTATCTCCAACAAATCTGGTGGTTTGAAGTGGATGGCGAAGTTGAGTTCCCATTTCCAGCTGGAACATATAGCTTATTCTTCAGAATACATTTAGGGAAACCCTCCAAGAGATTTGGAAGAAGGGTTTGCAACACAGAACATGTTCATGGTTGGGATGTAAAGCCTGTTAGATTCCAGCTATGGACTTCAGATGATCAATATGATTCATCGCAATGTTTTTTGAAAGGTCCAGGTAAATGGCGCTATTACCATGCCGGTGATTTTGTGGTTGAAGATAGTAATGTATCAACAAAAGTAAAATTTTCTATGACTCAAATTGATTGCACACATACTAAAGGTGGTCTCTGTTTAGATTCTGTGTTTGTGTATCCTAGTGAATTTAGAAAGGTTAAAGAATTTTTGAACTACTCTTAA 861 0.3751 MGILFSISSQSSSSPNPSLGELPESCIAVIMEYMDPPQICKLASLNRAFHGASLADFVWESKLPSNYHVIIQKIFDGSSFPSHLGKRGIYSRLCSLNTFDEGTKKVWLDRSMGKVCLSVSAKGLSITGIDDRRYWNHVPTEESRFSSVAYLQQIWWFEVDGEVEFPFPAGTYSLFFRIHLGKPSKRFGRRVCNTEHVHGWDVKPVRFQLWTSDDQYDSSQCFLKGPGKWRYYHAGDFVVEDSNVSTKVKFSMTQIDCTHTKGGLCLDSVFVYPSEFRKVKEFLNYS* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3677 286 PANTHER F-BOX PROTEIN PP2-A12 4 281 - -
Mtr4g3677 286 PANTHER F-BOX PROTEIN PP2-A15 4 281 - -
Mtr4g3677 286 SUPERFAMILY F-box domain 10 93 IPR036047 GO:0005515
Mtr4g3677 286 Pfam Phloem protein 2 114 273 IPR025886 -
Mtr4g3677 286 ProSiteProfiles F-box domain profile. 16 62 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3677 Mtr-Chr4 50537904 50540141 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3677 - - gmx:100788842 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3677 4 50537904 50540141 Mtr4g3677 4 50537904 50540141 ECH
Mtr4g3677 4 50537904 50540141 Mtr8g1033 8 12509672 12513247 ECH