Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3188 ATGGATCGTTTTTCTTCTACTACTATCCCTTTTGCATTACAAGGAGCAAAAGATGACCTAACCATGCAGATTTCTTTGATTTGGAGCCAAATCAAAGCTCCATTAATCGTTCCATTACTAAGAATATCAGTGTTTTTGTGTTTGATAATGTCGGTGATGATGTTCATTGAGAGGGTTTATATGGGTGTTGTCATTACTCTTGTGAAGCTATTTGGAAGAAAACCTGAAAAACGTTACAAATGGGAACCGATTAAGGATGATATTGAGTTAGGGAACTCTTGTTATCCTATGGTTCTTGTTCAAATACCTATGTACAATGAAAGAGAGGTTTATCAATTGTCAATTGGAGCTGCATGTGGTCTTTCATGGCCTTCTGATAGGATCATTATACAAGTTCTTGATGACTCCACTGACCCAACAATCAAGGAGTTGGTGCAACTAGAATGCCAAAGATGGGCAAGCAAAGGAGTGAATATAAAGTATGAAGTTAGGGACAATAGAAATGGATACAAAGCAGGGGCTTTAAAAGAAGGAATGAAGCATAGCTATGTGAAGCAATGTGATCATGTTGCAATATTTGATGCTGATTTTCAACCAGAGCCTGATTTTTTGTGGCGTACCGTACCATTTATGGTGCATAATCCTGAAATTGGGCTTATTCAAGCTCGTTGGAAATTTGTGAATTCGGATGAATGTATGATGACTAGAATGCAAGAGATGTCACTAGATTACCATTTTACTGTGGAACAAGAAGTGGGGTCTTCCACTTATGCCTTCTTTGGCTTCAACGGGACTGCGGGAGTGTGGAGAATTTCGGCGCTGAACGAGGCTGGTGGATGGAAGGATAGGACCACAGTTGAAGATATGGACTTGGCTGTTAGAGCTAGTCTCAAAGGGTGGAAGTTCTTATACTTGTCAAACTTGAAGGTTAAAAATGAACTGCCGAGTACTTTCAAGGCCTACCGTTACCAACAGCATCGTTGGTCTTGTGGACCAGCCAATCTTTTCCGAAAAATGGTCTTGGAGATTATTAGAAACAAGAAAGTGTCCTTGTGGAAGAAGATACATGTAATTTACAGTTTCTTCTTTGTTCGGAAAGTGATAGCACACATCAATACGTTTGTGTTTTATTGCATTGTTCTACCTGCAACAGTTTTGGTACCTGAAGTTGCAGTCCCAAAATGGGGAGCTGTTTATATTCCTTCAGTTATCACTCTTCTTAATGCAGTTGGAACTCCAAGGTCACTCCATTTACTCGTCTTTTGGATTCTATTTGAGAATGTCATGTCTCTGCATAGAGCAAAGGCAACTGTTATTGGTCTACTGGAGGCTAGTCGAGTGAATGAATGGATTGTCACTGAGAAACTTGGAGATGCTCTCAAGGCTAAAGCAGGGACTAAAGCACTCAAGAAGCCTCGATTCAGGATTGAAGACAGGATTCACTTGTTAGAACTTGGCGTTGGAATGTATCTCTTCTTTATCGGCTGCTACGATGTCATGTTTGGGAAAAACCACTTCTTCATCTTTCTCTTTATCCAAGCAATCGCCTTCTTCATCATGGCATTTGGATATGTCGGAACCTTCGTTCCCAACTGA 1596 0.4035 MDRFSSTTIPFALQGAKDDLTMQISLIWSQIKAPLIVPLLRISVFLCLIMSVMMFIERVYMGVVITLVKLFGRKPEKRYKWEPIKDDIELGNSCYPMVLVQIPMYNEREVYQLSIGAACGLSWPSDRIIIQVLDDSTDPTIKELVQLECQRWASKGVNIKYEVRDNRNGYKAGALKEGMKHSYVKQCDHVAIFDADFQPEPDFLWRTVPFMVHNPEIGLIQARWKFVNSDECMMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLSNLKVKNELPSTFKAYRYQQHRWSCGPANLFRKMVLEIIRNKKVSLWKKIHVIYSFFFVRKVIAHINTFVFYCIVLPATVLVPEVAVPKWGAVYIPSVITLLNAVGTPRSLHLLVFWILFENVMSLHRAKATVIGLLEASRVNEWIVTEKLGDALKAKAGTKALKKPRFRIEDRIHLLELGVGMYLFFIGCYDVMFGKNHFFIFLFIQAIAFFIMAFGYVGTFVPN* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3188 531 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9-LIKE 1 530 - -
Mtr7g3188 531 PANTHER - 1 530 - -
Mtr7g3188 531 Pfam Glycosyltransferase like family 2 97 331 - -
Mtr7g3188 531 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 89 312 IPR029044 -
Mtr7g3188 531 CDD CESA_CaSu_A2 96 332 - -
Mtr7g3188 531 SUPERFAMILY Nucleotide-diphospho-sugar transferases 95 374 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3188 Mtr-Chr7 48862116 48867980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3188 5 531 Miscellaneous Gene Families AT5G03760 81.250 0.0 932
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3188 K13680 - gmx:100782772 982.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3188 7 48862116 48867980 Mtr1g3394 1 45179733 45183005 ECH
Mtr7g3188 7 48862116 48867980 Mtr7g3188 7 48862116 48867980 ECH
Mtr7g3188 7 48862116 48867980 Mtr1g2078 1 30724666 30729017 PCT