Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g3043 ATGAAGAAACAATTAACAGGTTTAAGGGGTGATTCACACCTGCACTCTGCAATTCGAGTTGGAAATTTGGAATTGGTATTGGAAATCATCTCTGAAAATCAAGGGGAAGAATTAAAGGAGTTGTTTTCAAAGCAAAATAATTCAAGTGAAACTGCTTTATATATTGCTGCTGAAAATGGTCATCTTGATATAGTGAAGGAATTGATCAAATATCATGATATTGGGTTGGCTAGCTTGAAAGCTAGAAATGGATTTGATGCATTTCATGTTGCTGCTAAAAATGGAAACTTGGAGATATTGAAGGTGCTCACGGAGGCATTTCCTGAAATTTCAATGACAGTTGATCTGACAAACACTACTGCGCTGCACACAGCTGTGTCACAAGGACATATTGAAATTGTAAATTTTCTCTTAGAGAAAAGTAGTAGCGTCGTAACTATTGCGAAAAGCAACGGAAAAACTGCATTTCATTCTGCTGCAAGAAATGGCCACGTGGAGGTCATCAAGGCCCTGCTTGGCAGTGAACCTGAAATTGCAATGAGAGTTGATAAGAAGGGGCAAACAGCACTCCATATGGCAGTTAAAGGACAAAATCTGGAGGTAGTGGATGAGCTTTTGAAACTGAACCCGTCTTTTGCTAATATGGTGGATGCCAAGGGAAACACTGCACTTCATATAACAACCCGGAAGGGTCGTCTGCAGATTGTTCAGAAGCTACTAGAGTGCAAAGAAATAGACACTGATGTTATTGATAAATCTGGAGAAACGGCTTTGGATATTGCAGAGAGAACTGGTCGCTTGGACATCGCCAAATTTTTGCAGGATCGTGGAGCTCAAAATGCCAGGTCCGTCAAGTCACCTTCTAAAAACAGAGCCCTTGAACTCAAACAAACTGTGAGTGACATAAAGAGTGGGGTTCATAACCAGCTGGAGCACACATTTAAAACACAGAGACGTATGAAAGGCATAGCAAAGCGAATTAACAAAATGCAGGCTGAGGGGCTAAACAATGCAATCAACTCTAACACTGTAGTTGCTGTCCTCATTGCAACTGTTGCTTTCGCTGCCATATTTACTGTCCCAGGCCAGTATCCTCAGAACACAAAGAACCTTGCTCCTGGAATGTCTCCCGGGGAAGCCAATATTGCTCCCAATATTGAATTCTTGATATTTGTAATATTTGATTCTACGGCCCTCTTCATATCATTGGCTGTTGTGATTGTCCAAACGTCAGTGGTCGTTATTGAAAGGGAAGCAAAGAAACAAATGACGGCTGTTATAAACAAGTTAATGTGGATAGCATGTGTGTTAATTTCTGTGGCATTCCTTGCAATGTCATACATAGTTGTTGGGGATCAGAAAGAGTTGGCTATTGCAGCCACAGCTCTAGGAACAGTGATTATGGCAGCTACTCTAGGAACTCTCTGTTATTGGGTGATTGCTCACCGCCTCGAAGCCTCCAGATTACGAAGTCAAAGAACAATGACGAGCAGTAGGCATTCATTGACTATGTCGGGGATGTCAGCTTCTGAGAACGAGTATAAAACAGTGTACGCAATATAA 1563 0.4152 MKKQLTGLRGDSHLHSAIRVGNLELVLEIISENQGEELKELFSKQNNSSETALYIAAENGHLDIVKELIKYHDIGLASLKARNGFDAFHVAAKNGNLEILKVLTEAFPEISMTVDLTNTTALHTAVSQGHIEIVNFLLEKSSSVVTIAKSNGKTAFHSAARNGHVEVIKALLGSEPEIAMRVDKKGQTALHMAVKGQNLEVVDELLKLNPSFANMVDAKGNTALHITTRKGRLQIVQKLLECKEIDTDVIDKSGETALDIAERTGRLDIAKFLQDRGAQNARSVKSPSKNRALELKQTVSDIKSGVHNQLEHTFKTQRRMKGIAKRINKMQAEGLNNAINSNTVVAVLIATVAFAAIFTVPGQYPQNTKNLAPGMSPGEANIAPNIEFLIFVIFDSTALFISLAVVIVQTSVVVIEREAKKQMTAVINKLMWIACVLISVAFLAMSYIVVGDQKELAIAATALGTVIMAATLGTLCYWVIAHRLEASRLRSQRTMTSSRHSLTMSGMSASENEYKTVYAI* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g3043 520 SMART ANK_2a 151 180 IPR002110 GO:0005515
Mtr7g3043 520 SMART ANK_2a 48 76 IPR002110 GO:0005515
Mtr7g3043 520 SMART ANK_2a 253 283 IPR002110 GO:0005515
Mtr7g3043 520 SMART ANK_2a 83 112 IPR002110 GO:0005515
Mtr7g3043 520 SMART ANK_2a 185 214 IPR002110 GO:0005515
Mtr7g3043 520 SMART ANK_2a 219 249 IPR002110 GO:0005515
Mtr7g3043 520 SMART ANK_2a 9 40 IPR002110 GO:0005515
Mtr7g3043 520 SMART ANK_2a 117 147 IPR002110 GO:0005515
Mtr7g3043 520 Pfam Domain of unknown function 333 449 IPR026961 -
Mtr7g3043 520 ProSiteProfiles Ankyrin repeat profile. 117 149 IPR002110 GO:0005515
Mtr7g3043 520 ProSiteProfiles Ankyrin repeat region circular profile. 151 172 - -
Mtr7g3043 520 ProSiteProfiles Ankyrin repeat profile. 185 207 IPR002110 GO:0005515
Mtr7g3043 520 ProSiteProfiles Ankyrin repeat region circular profile. 253 279 - -
Mtr7g3043 520 ProSiteProfiles Ankyrin repeat profile. 151 183 IPR002110 GO:0005515
Mtr7g3043 520 ProSiteProfiles Ankyrin repeat profile. 83 115 IPR002110 GO:0005515
Mtr7g3043 520 SUPERFAMILY Ankyrin repeat 14 278 IPR036770 -
Mtr7g3043 520 ProSiteProfiles Ankyrin repeat region circular profile. 219 241 - -
Mtr7g3043 520 ProSiteProfiles Ankyrin repeat region circular profile. 83 105 - -
Mtr7g3043 520 PANTHER ANKYRIN REPEAT PLANT PROTEIN 1 520 - -
Mtr7g3043 520 ProSiteProfiles Ankyrin repeat region circular profile. 185 207 - -
Mtr7g3043 520 ProSiteProfiles Ankyrin repeat region circular profile. 48 70 - -
Mtr7g3043 520 ProSiteProfiles Ankyrin repeat profile. 48 70 IPR002110 GO:0005515
Mtr7g3043 520 Gene3D - 146 211 IPR036770 -
Mtr7g3043 520 Gene3D - 212 342 IPR036770 -
Mtr7g3043 520 Gene3D - 1 145 IPR036770 -
Mtr7g3043 520 ProSiteProfiles Ankyrin repeat profile. 253 279 IPR002110 GO:0005515
Mtr7g3043 520 ProSiteProfiles Ankyrin repeat region circular profile. 117 144 - -
Mtr7g3043 520 ProSiteProfiles Ankyrin repeat profile. 219 241 IPR002110 GO:0005515
Mtr7g3043 520 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 1 520 - -
Mtr7g3043 520 Pfam Ankyrin repeats (3 copies) 217 279 IPR002110 GO:0005515
Mtr7g3043 520 Pfam Ankyrin repeats (3 copies) 151 207 IPR002110 GO:0005515
Mtr7g3043 520 Pfam Ankyrin repeats (3 copies) 80 143 IPR002110 GO:0005515
Mtr7g3043 520 Pfam Ankyrin repeats (3 copies) 10 74 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g3043 Mtr-Chr7 47261107 47265027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr7g3043 1 520 Miscellaneous Gene Families AT1G07710 62.738 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g3043 - - gmx:100787392 838.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3043 7 47261107 47265027 Mtr7g3043 7 47261107 47265027 ECH
Mtr7g3043 7 47261107 47265027 Mtr2g3310 2 47170280 47173176 ECH
Mtr7g3043 7 47261107 47265027 Mtr4g1815 4 31194891 31198854 ECH