Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr7g1417 ATGATTATGCAGAAGAGGTTGGATTACAGTTTTAATGGCTATCAAGTTCCTAGAGCTTCAAGATCTCCTAGGGGGAGGGGTACAGTCAGGAAGAGACCTGACAGCAATCGGATACAAGCATTTGATATTTTGGCTAGTGTAGCGGGCAACCTTTTGCAGAAGAATCAGAGTTCCATTCCCGATAATGCTGCTTCTGCGAAAGATCCTCTCGCTGTTTTTGGTATTAACATAAAGGAAAATAAACAAGAGAATCAAGTAGGATCGTTTAAGGAGGAGCAATTTGAGAATGGAACTTGCAGTGAAGTTGTCTCTGGATGTGTCCCTAGTTTGCAAGGGAAACATGAAAATCAAAGAGTCGCAGGTGATTCATCGTTTCATGACAATCATCTTGAAGGGCAAGGACAGAATGTCATTGAGAGGGAAGATGAACGTGTGAAATTGAGAAGTACAAACGAGAAAACTATTCGCATCAAAAACCGATCTGATGGATTAATAGAACCAAGCCAAAGAGCATCAAGAGATTGCAGTGCGGAAAATCATGTGGAGAAACCTTCATTGGAGGGCCATTTCCGCAGGAATCTTGATTCTTTACCGAATGGTTCCGGTACTAGGAAATTACTTAATAGAGATGATGACGAAAACTTTGTTCGGTCCACTGAACTGAACTCAAAGAATAAGATACCTGACCCACCGACAGATACAATAAAGGTTAAGGATGCAAGTCCTTTCGTGAATGATGAGAACAATAGTGGGGACAATTCTGTGCTTGAAAATTCAGAAATGATGTATCCATTTAAGAAAAGAAAGTTTTTCTATCAAACCTCATCGTCTACGTCTGATAGTTGGTCTCACTGTCAAGGCACAGTTGATTCTTCTTGTACAAGGGTTAATGGCACGAACCATGGTACAGGCGGAACAATGCATGTAATTGAAGAATCGTCTTCTATAGCTGATGAAGAAGTTCATCCTGAGTCCAAGGGTTGTAACGTGAAGCTTAGCATAAAATCCTTTAAAGTCCCAGAGCTTTTTATTGATATCCCTGAAACTGCAACTATTGGTTCGCTGAAGAGGACAGTAATGGAAGCCGTGACAACTATACTTGGAGACGAACTGCACGTAGGCATCCTTCTTCAAGGGAAGAAGATTAGAGATGACAGTAAAACTTTGATCCAGACCGGGATATCTCAAGATGACAAACGTCATAGGTTAGGGTTCATGTTGGAGCCGAGACATAATCGAATTTCATCTTCATACAATGAAGACCCTTGTTTCCTAACCACTGGTTCACAACCAAAACTTTCTAGGCAATCAACATCTTTAATGTTACAACAAGGAACATATAATGTATCTCGGGAACGTTCTACGGTCAAAATTGAAAATTGCGCCGAAGGTGATCTCAACATGGTCTCCTCTCTAGGAGAAGCTTCAGCTAACAACAATAACATGTCAAAGTGTCGAGCTCTAGTCACAGTTCCTGCCATTAACATGGATGCATTAGCTGTGGTTCCATACCGGCGTAAATCAGGGAATTCCTACTTTGGACAGCGCCGAATCAGGAGGCCATTTTCGGTTCTAGAAGTAGAAGCATTGGTTCAGGCAGTTGAAAAACTAGGAACTGGAAGGTGGCGTGATGTCAAACAACGTGCTTTTGACCATGCAAAGCATCGAACTTATGTCGATTTGAAGGATAAGTGGAAGACCTTGGTTCACACAGCAAGAATTTCTCCTCAGCAAAGGAGAGGAGAACCTGTTCCTCAAGAGCTTCTCGACAGAGTCTTATCTGCTCATGCCTATTGGTCTCAACAACAATGCAAGCATCAATTTAAATCAATGTGA 1836 0.4167 MIMQKRLDYSFNGYQVPRASRSPRGRGTVRKRPDSNRIQAFDILASVAGNLLQKNQSSIPDNAASAKDPLAVFGINIKENKQENQVGSFKEEQFENGTCSEVVSGCVPSLQGKHENQRVAGDSSFHDNHLEGQGQNVIEREDERVKLRSTNEKTIRIKNRSDGLIEPSQRASRDCSAENHVEKPSLEGHFRRNLDSLPNGSGTRKLLNRDDDENFVRSTELNSKNKIPDPPTDTIKVKDASPFVNDENNSGDNSVLENSEMMYPFKKRKFFYQTSSSTSDSWSHCQGTVDSSCTRVNGTNHGTGGTMHVIEESSSIADEEVHPESKGCNVKLSIKSFKVPELFIDIPETATIGSLKRTVMEAVTTILGDELHVGILLQGKKIRDDSKTLIQTGISQDDKRHRLGFMLEPRHNRISSSYNEDPCFLTTGSQPKLSRQSTSLMLQQGTYNVSRERSTVKIENCAEGDLNMVSSLGEASANNNNMSKCRALVTVPAINMDALAVVPYRRKSGNSYFGQRRIRRPFSVLEVEALVQAVEKLGTGRWRDVKQRAFDHAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLSAHAYWSQQQCKHQFKSM* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr7g1417 611 CDD SANT_TRF 520 570 - -
Mtr7g1417 611 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 1 611 - -
Mtr7g1417 611 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 611 IPR031105 -
Mtr7g1417 611 MobiDBLite consensus disorder prediction 192 212 - -
Mtr7g1417 611 Gene3D - 509 611 - -
Mtr7g1417 611 SUPERFAMILY Ubiquitin-like 325 406 IPR029071 -
Mtr7g1417 611 SUPERFAMILY Homeodomain-like 520 601 IPR009057 -
Mtr7g1417 611 SMART sant 518 571 IPR001005 -
Mtr7g1417 611 MobiDBLite consensus disorder prediction 14 33 - -
Mtr7g1417 611 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 514 573 IPR017930 -
Mtr7g1417 611 ProSiteProfiles Myb-like domain profile. 514 569 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr7g1417 Mtr-Chr7 28833118 28839443 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr7g1417 - - gmx:100807254 847.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g1417 7 28833118 28839443 Mtr3g2060 3 34042894 34047702 ECH
Mtr7g1417 7 28833118 28839443 Mtr5g2720 5 35439654 35444754 ECH
Mtr7g1417 7 28833118 28839443 Mtr7g1417 7 28833118 28839443 ECH
Mtr7g1417 7 28833118 28839443 Mtr2g3359 2 47654132 47659639 ECH