Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g2720 ATGGTGTTGAAGAAGAGACTTGGTAATGGATTCAGGGACTATCAGGTCCCTAAGGTACCTAGATGTCCAAGATCTGTAAGAAGGACGGTTGCTTTCAAGAAACCAGTCGAGGATGGCCACTCTTGTGCTTTTGAACTACTTGCATCTTTAGCCGGCGAGTTGCTGAAGGAGAGTGAAAGTTCCGCTTCTAGCAATGCATCTGATGTTAAAACGTTAACAGAAGAGCGATTTCGAAATGGAAGTTGTGAAGAAAAGAGCAGTGAGAAACATCTCCAGAGTGCTGGGACTGATTGTATACTAGAATGTATTTCTGCTAACAATAATGTGCAGTCTGAAATTTTCAAATTGGAGAATAGGTTTGGAAATCATTCTAATACTAATAGATTAGTAGAAGTTCCAAACCATCATGAGGCTGACAGTTCAGGCTTCAAGCGATTATCTGCTGTTCATTCTCCTTCTTTAGCCAACTTGAGCGGTAACATTAAATCCCCATTTTGTGGGGAATTGTTTCCCAATGCTTCCTTTTCAAGGAATGGGAGGAATGATAGTAAGTTAGGTTTTATTGATGATGACGAAAACTTTATTAGGTGCAACAAAGTTTGCACCAAACCGAAGGCTTTTAGACCTTCACGATACATTGCACGCAAAATAATTAGGAAGCGGTGGACTTCCAATTCCAAACACTGGAAGGTTGCTCCAAAGTTGAAAGATTTTGAACTTTCTCGTTATGATAATGGAATGCGACCCTCGAGTCATAAGAGGAAGACTTATTACAATTTCGAAAGATCTCAGTGTCACACTCTTTTGAAGAGGAAGAAATTATCAGACAGGGGTTCGATGCTAACTCATGGTGGAGGATTCAGCAATGAGAGTGTATCCAATTCACCTAAGAAATTAATTGGAGGAAATAACCGTAGCTCATCTGCAAAAGTTCGTGTTTCTAAGGATTCTAATGTAAAGTTTCGCATCGAGTCATTCAGGATTCCAGAACTTTACGTTGAGGTTCCCGAAACCGCAACTGTTGCTTCATTAAAGAGGACAGTCATGGAGGCGGTGATGACTATAATAGGAGGTGGGGTGCATGTTGGTGTTCTTGTTAAGGGAAAAAAAGTTGGAGACGACAACAGAACTCTTCGTCAGACTGGTATATCTTGTAAAGAAAATATAGATAAACTTGGTTTCGTGTTGGAGCCTAGCTCTTCTCAAGCTTCTCCAGTTGTCTGTGCTGGTGATCCTTCTCACTGTGTAGCATCTCAGCCTACCAGGTCTCTAGGAACTCCCTCCATAGATTCAGGGATTTCTGTTGCCAAACAGGATTCCTCCCTGCATACAAATACTGGCGGTGACCTTGTTGGCATGAACCATGAATCAGCTTCTTCCCTTGCTGACACTATATCTGATAAACTTGACATTATATCTGATAAACTAACACAAGATTCCGGAGCGCTGGTTTCTGTTCCAGCTCATAGCACTGAGGCGTTAACTGTTGTTCCCGTGAATCAGAACACTGGACCATCCGAGCTTGTACAGCGTCGAACCAGGAGACCATTTTCTGTGTCTGAAGTTGAAGCACTTGTTCATGCAGTTGAGGAAGTTGGAACTGGAAGGTGGCGTGATGTAAAGTTGCGATGTTTTGAGAATGCAGACCATAGGACTTATGTAGACTTGAAGGATAAATGGAAAACTTTAGTGCACACTGCAAAAATCTCTCCTCAACAAAGGAGAGGACAGCCAGTTCCTCAGGAGCTATTGGATAGGGTTTTGGCTGCACATGCTTACTGGTCTATCCACCAATCCAAGCAGCATGTCAAGCATCAAACCAATGTTGTCCAACCACTTGTGATTATGTAG 1851 0.4225 MVLKKRLGNGFRDYQVPKVPRCPRSVRRTVAFKKPVEDGHSCAFELLASLAGELLKESESSASSNASDVKTLTEERFRNGSCEEKSSEKHLQSAGTDCILECISANNNVQSEIFKLENRFGNHSNTNRLVEVPNHHEADSSGFKRLSAVHSPSLANLSGNIKSPFCGELFPNASFSRNGRNDSKLGFIDDDENFIRCNKVCTKPKAFRPSRYIARKIIRKRWTSNSKHWKVAPKLKDFELSRYDNGMRPSSHKRKTYYNFERSQCHTLLKRKKLSDRGSMLTHGGGFSNESVSNSPKKLIGGNNRSSSAKVRVSKDSNVKFRIESFRIPELYVEVPETATVASLKRTVMEAVMTIIGGGVHVGVLVKGKKVGDDNRTLRQTGISCKENIDKLGFVLEPSSSQASPVVCAGDPSHCVASQPTRSLGTPSIDSGISVAKQDSSLHTNTGGDLVGMNHESASSLADTISDKLDIISDKLTQDSGALVSVPAHSTEALTVVPVNQNTGPSELVQRRTRRPFSVSEVEALVHAVEEVGTGRWRDVKLRCFENADHRTYVDLKDKWKTLVHTAKISPQQRRGQPVPQELLDRVLAAHAYWSIHQSKQHVKHQTNVVQPLVIM* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g2720 616 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 510 568 IPR017930 -
Mtr5g2720 616 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 1 615 - -
Mtr5g2720 616 Gene3D - 504 606 - -
Mtr5g2720 616 MobiDBLite consensus disorder prediction 285 306 - -
Mtr5g2720 616 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 615 IPR031105 -
Mtr5g2720 616 CDD SANT_TRF 515 565 - -
Mtr5g2720 616 ProSiteProfiles Myb-like domain profile. 509 564 IPR001005 -
Mtr5g2720 616 SUPERFAMILY Homeodomain-like 515 595 IPR009057 -
Mtr5g2720 616 SMART sant 513 566 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g2720 Mtr-Chr5 35439654 35444754 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g2720 - - mtr:MTR_5g080010 1168.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2060 3 34042894 34047702 Mtr5g2720 5 35439654 35444754 ECH
Mtr7g1417 7 28833118 28839443 Mtr5g2720 5 35439654 35444754 ECH
Mtr2g3359 2 47654132 47659639 Mtr5g2720 5 35439654 35444754 ECH
Mtr5g2720 5 35439654 35444754 Mtr5g2720 5 35439654 35444754 ECH