Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2060 ATGGTGTTTAAGAAGAGGGCAAATCATGGATTCAATGGCTTTCAAGTTCCGGTTATTCCTAGAGCTCCTAGATCTGCAAGAGGGAGGAGTTCATTAAACAAAAAGGTTAAGGATAATCAAGTTTGTGCTTTTGAAATATTGGCATCTATAGCTGGCAAGTTGCTGGAGGAGAGTGAAAGCTCTGCTTCTAGCAATGCATCTGAAGGCTTCATTGTGCAAGATCGACAAAATGAAGTTAAGCCATCAATAGCCGAGGGAATTCACCATGGAAGTTCTGGAGAAAGTATTTTTACAACCGAGGTAGCCTCACAAAACCTTGATCAGAAATCTTTTGTACATACCGAGACTGGTTTTTCATTGGAAAAAGCTGAAAAAGCTAATGTGAAGATTGAAGCTGTTGAATCAGATAATAAAGATAGGATTTATTCTAATAGATTAGTAGAAACACCAGAAAAATTCAGGGAGTCTTGTAACAGGAAAATAAAGAAAGGATTCAGATCCAATAAATGTGGTTTGAAAGACCGGTTGGAATTGTATATGTCTCCTGCTCCGGTTGACTCGAAAATTAATGTAAAGTATCCACTTCATAGGAAGCCATTTCCCACTGATACCTTTACCAAGCATGGGAATGGCATTAAGTTAGATTTTAGAGATGATGACGAAAACTTTTTAAGGTGCACGAAGGTTTGCACTAAGTCGAAGGCTTTTAGGTCTCCACGACGCATGGCACACCGCAGAATCAAGAATCTGCTGTCTTCTAAATACTGGAACGTTGCTCCAAAGTTGAAGGACTGCGAACTTTCTAGATCTGATCTTGAAATACCTCTTTACCGTAAGAGGAAGGTGTGTAACGGTTCCGACAGTTCTCATCACAACACTACTGTTAAGAAGAGGAAATTCTTTGACCGGGTTTCTGGGGTAACTTCTGATGGAGGATTTAGCAGCGAGAGTGTATCTAATTCGCCTGAGAAAGGAACAGATGGACACAAACCCAGCTCTTCTTCGAAACTGCAAGTAACGGAGGATTCTCGTGTGAAGTTTAGCATTAAGTCATTCAGGATACCCGAGCTTTACATTGAGGTTCCCGAATCTGCAACCGTTGGTTCACTAAAGAGGACAGTAATGGAGGCAGTGATGGCTATAATTGGAGGCGGTATGCATGTTGGTGTTCTTCTTCAGGGGGAAGAAATTGGAGATGACAATAGAACACTTGAGCAGACCGGTTTATCTTGCAATGAGAATCTGGATACCCTCAGCTTCATGTTGGAGCCTAGTTCTCTACTAGCTTCTCCGGTTTCTTGTGTTGGTGATCCTTCTTCTCAATGCGAAACATCCGAACCGATCAGGTTGCCAGAAACTCCCGCATTAGATTCAGGGATAACCGATACCGTACGTGACTCCTATTTGCCGATAAATCCAGGCAACCTAGTGGAAAATAACCATGACTCTACTTATTCTCCCACTGACACTATAGTTGACAAAGTAACACCAGATCAATCCAGAGCCATAGTTGCACTTCCGGCTAGCACCGAAGCATTAGCTGTGGTTCCTGTGAGTCAGAAAATCAAGCGCTCTGAGTTTGCAAATCGTAGAACCCGGAGGCCATTCTCTGTGACTGAGGTAGAAGCACTTGTTCATGCAGTTGAAGAACTTGGGACTGGAAGGTGGCGTGATGTTAAGTTACGAGCTTTTGAGAATGCAGATCATAGAACTTATGTAGACTTAAAGGATAAATGGAAAACACTAGTGCACACTGCAAAAATCTCCCCTCAACAAAGGAGAGGAGAGCCAGTACCTCAGGAGCTATTGGACAGAGTTTTAGGAGCACATGCTTACTGGTCTCAGCACCAAATCAAGCAACATGGGAAGCATCAATGTGGAACAGGAACATTGAAGATTACAGAAGCCTCAGCTGAAAGGGTGTCCACTCAAGTGTAG 1938 0.4267 MVFKKRANHGFNGFQVPVIPRAPRSARGRSSLNKKVKDNQVCAFEILASIAGKLLEESESSASSNASEGFIVQDRQNEVKPSIAEGIHHGSSGESIFTTEVASQNLDQKSFVHTETGFSLEKAEKANVKIEAVESDNKDRIYSNRLVETPEKFRESCNRKIKKGFRSNKCGLKDRLELYMSPAPVDSKINVKYPLHRKPFPTDTFTKHGNGIKLDFRDDDENFLRCTKVCTKSKAFRSPRRMAHRRIKNLLSSKYWNVAPKLKDCELSRSDLEIPLYRKRKVCNGSDSSHHNTTVKKRKFFDRVSGVTSDGGFSSESVSNSPEKGTDGHKPSSSSKLQVTEDSRVKFSIKSFRIPELYIEVPESATVGSLKRTVMEAVMAIIGGGMHVGVLLQGEEIGDDNRTLEQTGLSCNENLDTLSFMLEPSSLLASPVSCVGDPSSQCETSEPIRLPETPALDSGITDTVRDSYLPINPGNLVENNHDSTYSPTDTIVDKVTPDQSRAIVALPASTEALAVVPVSQKIKRSEFANRRTRRPFSVTEVEALVHAVEELGTGRWRDVKLRAFENADHRTYVDLKDKWKTLVHTAKISPQQRRGEPVPQELLDRVLGAHAYWSQHQIKQHGKHQCGTGTLKITEASAERVSTQV* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2060 645 Gene3D - 521 625 - -
Mtr3g2060 645 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 636 IPR031105 -
Mtr3g2060 645 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 528 587 IPR017930 -
Mtr3g2060 645 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 1 636 - -
Mtr3g2060 645 CDD SANT_TRF 534 584 - -
Mtr3g2060 645 MobiDBLite consensus disorder prediction 309 339 - -
Mtr3g2060 645 SMART sant 532 585 IPR001005 -
Mtr3g2060 645 ProSiteProfiles Myb-like domain profile. 528 583 IPR001005 -
Mtr3g2060 645 SUPERFAMILY Homeodomain-like 534 615 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2060 Mtr-Chr3 34042894 34047702 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2060 - - gmx:100795471 875.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2060 3 34042894 34047702 Mtr5g2720 5 35439654 35444754 ECH
Mtr7g1417 7 28833118 28839443 Mtr3g2060 3 34042894 34047702 ECH
Mtr2g3359 2 47654132 47659639 Mtr3g2060 3 34042894 34047702 ECH
Mtr3g2060 3 34042894 34047702 Mtr3g2060 3 34042894 34047702 ECH