Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0822 ATGTCAGAACCTTTGGCTTCTGGGAATGGTTCTTTTAAGAAGAAAGCAATGAATGCCTCAAACATTCTCAGGAATTCTTTGGCAAAAAAGGGTAGGCGAAGTAGTAAGGTCATGTCTGTTGAAATTGAGGATGTTCATGATGCCGAGGAGTTGAAAGCTGTTGAAGAGTTCCGTCAAGCTCTTATATCGGAAGACCTCCTCCCTGAGAAACATGATGACTATCATATGATGCTTAGATTCCTTAAGGCCAGGAAATTTGAAATTGATAAATCAAAGCTGATGTGGTCTGACATGCTGAAATGGAGGAAGGAATTCGGTGCTGACACTATTGCGGAGGAATTTGAATTCAAGGAAATTGATGAAGTATTGAAATATTATCCACAAGGACATCATGGTGTAGATAAAGAAGGACGGCCTGTGTATATAGAAAGATTAGGACAAGTCGATGCGACCAAGATGATGCAAGTCACAACCATGGATCGCTATATCAAATACCATGTAAAGGAGTTTGAGAGGACATTCGATGTAAAGTTTGCGGCTTGTTCCATTGCTGCCAAGAAGCACATCGATCAAAGTACGACTATCCTGGATGTGGAGGGAGTGGGGCTTAAAAGCTTCAGCAAACATGCTAGGGAACTTGTTACTCGCATTCAGAAGGTTGATGGTGACAACTATCCAGAGACCTTGAATCGCATGTTCATCATCAATGCAGGTTCTGGATTTAGAATACTGTGGAACACTGTAAAATCCTTCCTTGATCCCAAGACCACAGCAAAAATCAATGTTCTTGGCAACAAGTATGATAGTAAGTTGCTTGAAATAATTGACGAAAGTGAATTGCCTGAGTTTTTAGGAGGTAAATGTAAATGCGCTGATGAAGGAGGATGTATGCGTTCGGATAAGGGCCCATGGAAAGATCCTGAAATTCTGAGGTTGGTTGAGAATGGGGCTCACAAATGTTCAAAAAAATCTGAGTCTAACGTTGACGAAGAGAAAACAGCTTCTGAGGACCACACAGCTTCCAAGTTGGAGGAAAATCTCACCACCTCACAAGTTTCTCCGATTTCTGAAGAGGTCCCTGCTACTAAAGCTTCCAAGCACGAGGATCCAATCCCGGTAGTTGATAACAAAACTGCTCAGAAAAAAGTTGACGAGACAGACCCAATGGCAACCTCAGAAGAGTTTGTGACTGTCATGAAACGCATGACTGAGTTGGAACAGAAAATGACAAACATTAATCATCAGCCTGTTGTAATGCCACCTGAGAAGGAGGAAATGCTACATAATACTATTAATCGAGCTGATTTATTGGAAAAAGAACTCTTGGCGACCAAGAAGGCTTTAGAGGATTCACTGGTTAAGCAAGAGGAGATTTCGGCTTATGTTGAGCAGAAAAAACAGAATAGAAGAAAGTGTTTTTGTTTCTGGTAA 1431 0.413 MSEPLASGNGSFKKKAMNASNILRNSLAKKGRRSSKVMSVEIEDVHDAEELKAVEEFRQALISEDLLPEKHDDYHMMLRFLKARKFEIDKSKLMWSDMLKWRKEFGADTIAEEFEFKEIDEVLKYYPQGHHGVDKEGRPVYIERLGQVDATKMMQVTTMDRYIKYHVKEFERTFDVKFAACSIAAKKHIDQSTTILDVEGVGLKSFSKHARELVTRIQKVDGDNYPETLNRMFIINAGSGFRILWNTVKSFLDPKTTAKINVLGNKYDSKLLEIIDESELPEFLGGKCKCADEGGCMRSDKGPWKDPEILRLVENGAHKCSKKSESNVDEEKTASEDHTASKLEENLTTSQVSPISEEVPATKASKHEDPIPVVDNKTAQKKVDETDPMATSEEFVTVMKRMTELEQKMTNINHQPVVMPPEKEEMLHNTINRADLLEKELLATKKALEDSLVKQEEISAYVEQKKQNRRKCFCFW* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0822 476 CDD SEC14 119 287 IPR001251 -
Mtr5g0822 476 SMART sec14_4 118 289 IPR001251 -
Mtr5g0822 476 MobiDBLite consensus disorder prediction 320 343 - -
Mtr5g0822 476 MobiDBLite consensus disorder prediction 320 369 - -
Mtr5g0822 476 Pfam CRAL/TRIO domain 124 286 IPR001251 -
Mtr5g0822 476 SMART CRAL_TRIO_N_2 73 98 IPR011074 -
Mtr5g0822 476 SUPERFAMILY CRAL/TRIO N-terminal domain 47 113 IPR036273 -
Mtr5g0822 476 Gene3D - 106 317 IPR036865 -
Mtr5g0822 476 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH10-RELATED 382 471 - -
Mtr5g0822 476 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH10-RELATED 10 385 - -
Mtr5g0822 476 MobiDBLite consensus disorder prediction 344 358 - -
Mtr5g0822 476 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 118 292 IPR001251 -
Mtr5g0822 476 SUPERFAMILY CRAL/TRIO domain 118 311 IPR036865 -
Mtr5g0822 476 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 10 385 - -
Mtr5g0822 476 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 382 471 - -
Mtr5g0822 476 Gene3D - 28 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0822 Mtr-Chr5 8088987 8094040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g0822 79 283 Acyl Lipid Metabolism Gene Families AT5G47730 29.952 5.35e-19 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0822 - - gmx:100527533 743.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g0822 5 8088987 8094040 Mtr8g2465 8 35084005 35089597 ECH
Mtr5g0822 5 8088987 8094040 Mtr5g0822 5 8088987 8094040 ECH
Mtr4g2126 4 34770586 34774543 Mtr5g0822 5 8088987 8094040 ECH