Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g2126 ATGTGGGACACTATGTCTGGACCTATTACTATTGATCGACCTGTTAAAGGTCTTGAGATTGAATATTTGGAGGATGAAAAGAAAACAAGGCTTGGATCCTTAAAGAAGGTAGCAATAAGTGCATCTTCTAAGTTCAAACATTCCTTCAAGAAGGGGCGAAGGCACAACAGGGTTATATCTGTCTTCGAGGATGAAATCGATACAGAAGAGTTGCAGGCAATCGATGCTTTTCGTCAAGCACTTATCCTAGAAGAACTATTACCCTCAAAACATGATGATCATCATATGATGCTAAGATTCTTGAGAGCAAGGAAGTTTGACATTGAAAAAACAAAGCAAATGTGGGCAGATATGCTCCAATGGAGGAGGGAATTTGGTGCTGACACTATCATGGAGGATTTTGAATTCGAGGAGGTAGACGAAGTTCTAAAATACTACCCTCAAGGAACACATGGAGTTGATAAGGATGGAAGACCTGTTTACATAGAAAGGTTGGGTTTGGTTGACTCGAACAAACTGATGCAAGTAACGACTATGGACCGATATCTTAAGTACCACGTACGGGAGTTTGAGAAGACATCCAATGTTAAGATGCCTGCTTGTTCAATTGCAGCAAAGAAGCACATTGATCAAAGCACAACTATCTTGGATGTCCAAGGAGTGGGTCTCAAAAGTATGAATAAAGCTGCAAGAGATCTCATCCAAAGGCTTCAGAAGATTGATGGTGACAACTATCCTGAGTCCCTGAACCGTATGTTCATCATCAATGCTGGTTCGGGATTTAGGATTTTGTGGAACACTGTTAAGTCCTTCCTTGATCCCAAGACTACCTCGAAAATCCACGTCCTAGGTAACAAATATCAGAGCAAGTTGCTTGAAATCATCGATGCCAGTGAACTTCCAGAGTTCTTGGGGGGTACGTGTACTTGTGCAGACAAAGGTGGTTGCATGCTTTCTGACAAGGGACCATGGAATGATCCAGAAATCTTGAAGATGGTTCAAAACGGTGAAGCAAAATGCAGAAGGAAAACTTTATCCGAAGTTGAGGAGAAAACAATCGTCGAAGACGAAGGAGTGTGTCAAAAGGGATGTGATTCTTTCAACAAAGAATACGTTCTCGAGGAGGCATGCCATGCTATAGCAGAAGTAGCAAAACAATGTAATGCATATCAGTTCGACACCTTGGTCTCAATGAATGACAAACAAGTATCTTGGGAGGAATCATTACAAAATGATCAAAAGGCACTTTCTAAAAATTGCTTTGGTAACAATGTTTGCAAGACTGGATTTAGAAATCAATTTTCCGGCAGAATTATGGCCATGGTTTTGGGAATCATGACGTTCATCCGCATGACACGGAATATACCAACGAAAATGACTGCAATTGCATTGTATGGTAACTCGGTATATATTGATAGCAATATGGTGAAAGCAGCACCTGTCATTTCCGTTGATGATCACATGGCTCTAATGAAGCGCATGACCGATCTAGAAGAGAAGGTGAATATTCTCAGCATGAGACCTTCCATGCCACCAGAAATGGAGGAATTGCTCAACAGTACTCTAACCCGTGTCGATACACTGGAACAAGAGTTGGCTACAGCCAAGAAGGCACTTGATGATGCCCTTGCTAAGCAAGTGGAGCTTCAATCACATATCAACAAAAAGAAAAAGAAGAAAAAGTTGTTCCACTGGTAA 1698 0.4128 MWDTMSGPITIDRPVKGLEIEYLEDEKKTRLGSLKKVAISASSKFKHSFKKGRRHNRVISVFEDEIDTEELQAIDAFRQALILEELLPSKHDDHHMMLRFLRARKFDIEKTKQMWADMLQWRREFGADTIMEDFEFEEVDEVLKYYPQGTHGVDKDGRPVYIERLGLVDSNKLMQVTTMDRYLKYHVREFEKTSNVKMPACSIAAKKHIDQSTTILDVQGVGLKSMNKAARDLIQRLQKIDGDNYPESLNRMFIINAGSGFRILWNTVKSFLDPKTTSKIHVLGNKYQSKLLEIIDASELPEFLGGTCTCADKGGCMLSDKGPWNDPEILKMVQNGEAKCRRKTLSEVEEKTIVEDEGVCQKGCDSFNKEYVLEEACHAIAEVAKQCNAYQFDTLVSMNDKQVSWEESLQNDQKALSKNCFGNNVCKTGFRNQFSGRIMAMVLGIMTFIRMTRNIPTKMTAIALYGNSVYIDSNMVKAAPVISVDDHMALMKRMTDLEEKVNILSMRPSMPPEMEELLNSTLTRVDTLEQELATAKKALDDALAKQVELQSHINKKKKKKKLFHW* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g2126 565 SUPERFAMILY CRAL/TRIO domain 137 334 IPR036865 -
Mtr4g2126 565 Gene3D - 126 338 IPR036865 -
Mtr4g2126 565 SUPERFAMILY CRAL/TRIO N-terminal domain 62 134 IPR036273 -
Mtr4g2126 565 SMART sec14_4 138 309 IPR001251 -
Mtr4g2126 565 SMART CRAL_TRIO_N_2 93 118 IPR011074 -
Mtr4g2126 565 CDD SEC14 143 307 IPR001251 -
Mtr4g2126 565 Pfam CRAL/TRIO domain 144 306 IPR001251 -
Mtr4g2126 565 Pfam CRAL/TRIO, N-terminal domain 90 117 IPR011074 -
Mtr4g2126 565 Coils Coil 518 545 - -
Mtr4g2126 565 Gene3D - 43 125 - -
Mtr4g2126 565 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 8 563 - -
Mtr4g2126 565 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 8 563 - -
Mtr4g2126 565 PRINTS Cellular retinaldehyde-binding protein signature 96 118 - -
Mtr4g2126 565 PRINTS Cellular retinaldehyde-binding protein signature 265 284 - -
Mtr4g2126 565 PRINTS Cellular retinaldehyde-binding protein signature 298 307 - -
Mtr4g2126 565 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 138 312 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g2126 Mtr-Chr4 34770586 34774543 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g2126 72 303 Acyl Lipid Metabolism Gene Families AT5G47730 28.631 1.66e-22 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g2126 - - lja:Lj3g3v3363570.1 795.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g2126 4 34770586 34774543 Mtr4g2126 4 34770586 34774543 ECH
Mtr4g2126 4 34770586 34774543 Mtr5g0822 5 8088987 8094040 ECH
Mtr4g2126 4 34770586 34774543 Mtr8g2465 8 35084005 35089597 ECH