Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g3593 ATGAGTCCCGATGGTGATCTCCTCAGTATCGAACCTCTCGAACTCAAGTTCCCCTTTGAGCTGAAGAAGCAGATCTCGTGTTCTCTTCAATTGTCTAATAAGACTGATAGCTATGTAGCTTTCAAGGTGAAAACAACCAATCCCAGGAAGTATTGTGTTCGTCCTAACACTGGAATTGTCTTGCCAAGATCTACCTGCGATGTTATGGTTACCATGCAAGCGCAAAAAGAAGCTCCAGCCGATATGCAATGCAAGGATAAGTTTCTTCTTCAGAGCGTAAAAACCAACGATGGTGTCAGTCCAAAAGATATCTCTGCGGAGATGTTCAACAAGGAGGCAGGGCATGTGGTCGAGGAGTGCAAATTGAGAGTGGTGTATGTCTCTCCGCCGCAACCACCATCTCCAGTCCCAGAAGGTTCTGAGGAAGGGTCATCACCTAGAGGTTCTTTTTCAGAAAATGGAAATGCCAATGGTCCTGAATTCGCACAAGTAACAAGAGGATCTGCTGAACGACCTGAGGCTCAAGACAAATCTGCAGAGGCAAGAGCTCTTATCTCAAGGCTGACTGAAGAAAAGAATAATGCAATTCAACAAACTAGCAGGCTCCGCCAGGAACTGGAGCTGCTGAAGCGCGAAGGCAACAGAAATCGTGGTGGAGTGTCATTTATCATCGTCATATTAATCGGCTTACTTGGCTTAATCATGGGGTATCTCATGAAGAAGGCATAA 729 0.4568 MSPDGDLLSIEPLELKFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPRKYCVRPNTGIVLPRSTCDVMVTMQAQKEAPADMQCKDKFLLQSVKTNDGVSPKDISAEMFNKEAGHVVEECKLRVVYVSPPQPPSPVPEGSEEGSSPRGSFSENGNANGPEFAQVTRGSAERPEAQDKSAEARALISRLTEEKNNAIQQTSRLRQELELLKREGNRNRGGVSFIIVILIGLLGLIMGYLMKKA* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g3593 242 PIRSF VAMP_assoc_prot 1 241 IPR016763 GO:0005789
Mtr4g3593 242 Coils Coil 178 212 - -
Mtr4g3593 242 ProSiteProfiles Major sperm protein (MSP) domain profile. 7 127 IPR000535 -
Mtr4g3593 242 Pfam MSP (Major sperm protein) domain 8 112 IPR000535 -
Mtr4g3593 242 MobiDBLite consensus disorder prediction 128 180 - -
Mtr4g3593 242 Gene3D Immunoglobulins 3 131 IPR013783 -
Mtr4g3593 242 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 4 240 IPR016763 GO:0005789
Mtr4g3593 242 SUPERFAMILY PapD-like 2 142 IPR008962 -
Mtr4g3593 242 PANTHER VESICLE-ASSOCIATED PROTEIN 1-2-LIKE 4 240 - -
Mtr4g3593 242 MobiDBLite consensus disorder prediction 144 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g3593 Mtr-Chr4 49655918 49661203 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g3593 - - gmx:100527687 350.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3593 4 49655918 49661203 Mtr4g3593 4 49655918 49661203 ECH
Mtr5g0408 5 3734487 3738292 Mtr4g3593 4 49655918 49661203 PCT
Mtr4g3593 4 49655918 49661203 Mtr5g0457 5 4210318 4214602 PCT