Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g0457 ATGACTGCAACTCCCTTAATCACTATTAGTCCCGACGAGCTCAGGTTTCATTTTGAGCTGGAAAAGCAAACATTTTGTGATCTAAAAGTCCTCAATAACACAGAGAACTATGTTGCTTTCAAGGTCAAAACCACTTCACCAAAGAAGTACTTTGTACGACCAAACACTGGGGTTATTCATCCTTGGGACTCATGTATCATCAGAGTCACCCTTCAAGCCCAACGCGAATACCCTCCAGATATGCAATGTAAAGACAAGTTTCTCTTACAGAGTACGATAGTGGGTCCAAATACTGATGTTGATGATCTTCCGGCAAATACTTTTAATAAGGATAGTGGTAATTCAATAGAAGATTTGAAACTAAGAGTTGCATATATCACTCCCTCTTCACCCGAAGGAAGCTCTGAAGATGATGCCGGAAAGAACTCTGCACAAAAACTCGATAGCTCTTCTAATCAGGCTGTACAGCTCTTGAAGGAAGAAATAGAGGCTGCTGCCAGACAAACGCGACAGCTTCAACAGGAACTGGACATGCTGAGAAGGCGTAGAAACCAGAGAGGCGATCCTGGCTTTTCCCTCACCTTCGCCTTTTTTGTTGGTCTCCTTGGATTTTTGCTTGGCTTTCTTTTGAAATTTTTATTCTCTTCACCATCTACAGAATAA 663 0.4193 MTATPLITISPDELRFHFELEKQTFCDLKVLNNTENYVAFKVKTTSPKKYFVRPNTGVIHPWDSCIIRVTLQAQREYPPDMQCKDKFLLQSTIVGPNTDVDDLPANTFNKDSGNSIEDLKLRVAYITPSSPEGSSEDDAGKNSAQKLDSSSNQAVQLLKEEIEAAARQTRQLQQELDMLRRRRNQRGDPGFSLTFAFFVGLLGFLLGFLLKFLFSSPSTE* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g0457 220 Gene3D Immunoglobulins 2 130 IPR013783 -
Mtr5g0457 220 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 3 217 IPR016763 GO:0005789
Mtr5g0457 220 Coils Coil 155 182 - -
Mtr5g0457 220 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Mtr5g0457 220 PIRSF VAMP_assoc_prot 1 157 IPR016763 GO:0005789
Mtr5g0457 220 PIRSF VAMP_assoc_prot 141 212 IPR016763 GO:0005789
Mtr5g0457 220 Pfam MSP (Major sperm protein) domain 7 110 IPR000535 -
Mtr5g0457 220 PANTHER VESICLE-ASSOCIATED PROTEIN 2-1 3 217 - -
Mtr5g0457 220 SUPERFAMILY PapD-like 4 136 IPR008962 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g0457 Mtr-Chr5 4210318 4214602 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g0457 - - gmx:100794270 337.035
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g3593 4 49655918 49661203 Mtr5g0457 5 4210318 4214602 PCT