Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3692 ATGAAGCTTGCATTTGCAATACTCCTTCTTGTCCTCAGCTCCTCTTTATTGGAAGTCTCATTTGCTGGTTCTGATTTCTGTAACAGCAAGTGTGCAGTAAGGTGCTCCAAAGCTTCGATTCAGGACAGATGCTTGAAGTTTTGTGGGATATGTTGTGAGAAATGTAACTGTGTACCATCTGGGACTTATGGCAACAAAGATGAGTGTCCTTGTTACAGAGACATGAAGAATTCAAAGGGCAAAGGAAAATGCCCTTAA 258 0.4147 MKLAFAILLLVLSSSLLEVSFAGSDFCNSKCAVRCSKASIQDRCLKFCGICCEKCNCVPSGTYGNKDECPCYRDMKNSKGKGKCP* 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3692 85 PANTHER SNAKIN-1-RELATED 4 85 - -
Mtr3g3692 85 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 4 85 - -
Mtr3g3692 85 Pfam Gibberellin regulated protein 26 85 IPR003854 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3692 Mtr-Chr3 50766600 50767955 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3692 - - mtr:MTR_3g102660 170.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3692 3 50766600 50767955 Mtr1g4050 1 52090924 52091658 ECH
Mtr3g3692 3 50766600 50767955 Mtr3g3692 3 50766600 50767955 ECH
Mtr1g0475 1 5475942 5477503 Mtr3g3692 3 50766600 50767955 PCT