Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0475 ATGAAGCCAGCATTTGCAGCTATGTTACTTGTGTGTCTTATCCTTAGCTCATTTATGTTCGAAATGTCCATTGCTGGCACTGATTCAGGCCGTTTCTGTTCCTCCAAATGTGGGCAGAGGTGCTCTAAAGCTGGGATGAAGGACAGATGCATGAAGTTTTGTGGGATATGTTGCGGTAAATGTAAGTGTGTGCCATCAGGAACTTATGGGAACAAACATGAGTGCCCTTGTTATAGGGACATGAAGAACTCTAAGGGAAAGCCAAAATGCCCTTAA 276 0.4384 MKPAFAAMLLVCLILSSFMFEMSIAGTDSGRFCSSKCGQRCSKAGMKDRCMKFCGICCGKCKCVPSGTYGNKHECPCYRDMKNSKGKPKCP* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0475 91 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 1 91 - -
Mtr1g0475 91 Pfam Gibberellin regulated protein 32 91 IPR003854 -
Mtr1g0475 91 PANTHER GIBBERELLIN REGULATED PROTEIN 1 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0475 Mtr-Chr1 5475942 5477503 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0475 - - gmx:100500113 151.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0475 1 5475942 5477503 Mtr1g4050 1 52090924 52091658 ECH
Mtr1g0475 1 5475942 5477503 Mtr1g0475 1 5475942 5477503 ECH
Mtr1g0475 1 5475942 5477503 Mtr3g3692 3 50766600 50767955 PCT