Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g4050 ATGAAGCCTCTCTTCACCATGTTGCTATTCTGTTCCCTTCTTCTATGCTCCTCTTTCTTGGAGCTAGCCATTGCATATGAGGATTCATCCAATTGTAGCAGCAAGTGTTCAGACAGATGCTCTAAAGCAGGGGTTCAAGATAGGTGTGTGAAGTACTGTGAAATATGCTGCAATGAGTGCAAATGTGTTCCTTCTGGGACTTATGGAAACAAGCATGAATGTCCTTGCTACAGAGACAAGGTTAACAATAAGGGAAAGCCCAAATGCCCTTGA 273 0.4322 MKPLFTMLLFCSLLLCSSFLELAIAYEDSSNCSSKCSDRCSKAGVQDRCVKYCEICCNECKCVPSGTYGNKHECPCYRDKVNNKGKPKCP* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g4050 90 PANTHER PEAMACLEIN-LIKE 1 90 - -
Mtr1g4050 90 Pfam Gibberellin regulated protein 31 90 IPR003854 -
Mtr1g4050 90 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 1 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g4050 Mtr-Chr1 52090924 52091658 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g4050 - - vra:106771497 152.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g4050 1 52090924 52091658 Mtr1g4050 1 52090924 52091658 ECH
Mtr1g0475 1 5475942 5477503 Mtr1g4050 1 52090924 52091658 ECH
Mtr3g3692 3 50766600 50767955 Mtr1g4050 1 52090924 52091658 ECH