Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3331 ATGGCGGCGAATTCGTCTAATGGAGATCAACATAATGGAGATCAACAGACAACAACAAAGCAGCCTCCCCTGCCATCTCCATTGCGATTTTCCAAATTCTTTCAGTCCAATATGAGAATTTTGGTGACCGGAGGAGCTGGTTTTATTGGTTCTCACCTTGTTGACAGATTGATGGAAAATGAGAAAAACGAGGTAATTGTAGCTGATAATTACTTCACTGGATGTAAAGACAACCTTAAAAAATGGATTGGTCATCCGAGATTTGAGCTAATTCGCCACGATGTGACAGAGACACTGTTGGTTGAGGTTGATCGGATCTACCATCTTGCCTGCCCTGCTTCTCCAATCTTCTACAAATACAATCCTGTAAAGACAATAAAGACTAATGTAATTGGAACACTGAACATGCTTGGGCTTGCAAAGCGAGTTGGAGCAAGGATTTTGCTTACATCTACTTCAGAAGTATATGGAGACCCTCTTATCCATCCACAACCAGAAACTTATTGGGGAAATGTCAATCCTATTGGAGTTCGGAGTTGCTATGATGAGGGCAAGCGTGTGGCAGAAACTTTGATGTTTGATTATCATAGGCAGCATGGACTAGAAATACGCATTGCCAGAATCTTCAACACATATGGACCACGCATGAATATCGATGATGGGCGTGTCGTCAGCAACTTTATTGCTCAGGCAATTCGTGGTGAACCCTTAACAGTCCAACTTCCAGGAACACAAACTCGCAGTTTCTGCTATGTCTCTGACATGGTTGATGGCCTTATTCGTCTCATGGAAGGAGAAAACACTGGTCCAATCAACATTGGGAACCCAGGCGAGTTTACTATGACTGAACTTGCTGAGAATGTGAAGGAGCTTATTAATCCAGCTGTGGAGATAAAGATGGTAGAGAACACCCCTGATGATCCTCGGCAAAGAAAACCTGATATAACAAAAGCAACAGAATTGCTTGGATGGGAACCAAAGGTCAAGTTGCGGGATGGCCTTCCTCTTATGGAAGAGGATTTCCGTCTAAGGCTTGGGGTTCCTAGAAAAAACTAA 1056 0.4309 MAANSSNGDQHNGDQQTTTKQPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNYFTGCKDNLKKWIGHPRFELIRHDVTETLLVEVDRIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQPETYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGLEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQLPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMTELAENVKELINPAVEIKMVENTPDDPRQRKPDITKATELLGWEPKVKLRDGLPLMEEDFRLRLGVPRKN* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3331 351 CDD UGD_SDR_e 38 342 - -
Mtr2g3331 351 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 33 342 IPR036291 -
Mtr2g3331 351 MobiDBLite consensus disorder prediction 1 26 - -
Mtr2g3331 351 Gene3D - 166 345 - -
Mtr2g3331 351 Gene3D - 35 165 - -
Mtr2g3331 351 Pfam GDP-mannose 4,6 dehydratase 41 335 IPR016040 -
Mtr2g3331 351 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 8 351 IPR044516 GO:0042732|GO:0048040|GO:0070403
Mtr2g3331 351 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 8 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3331 Mtr-Chr2 47373356 47378194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3331 35 334 Miscellaneous Gene Families AT1G02000 24.179 3.21e-16 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3331 K08678 - gmx:100790835 668.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3331 2 47373356 47378194 Mtr2g3331 2 47373356 47378194 ECH
Mtr2g3331 2 47373356 47378194 Mtr4g1853 4 31637630 31642141 ECH
Mtr2g3331 2 47373356 47378194 Mtr4g1633 4 28521870 28524980 PCT
Mtr4g1853 4 31637630 31642141 Mtr2g3331 2 47373356 47378194 PCT