Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1633 ATGGCGTCACCCTCTTCAACACGCATAGATCTCGACGGAAACCCAATCAAACCTCTCACAATCTGCATGATTGGTGCCGGTGGCTTCATCGGTTCTCATCTCTGCGAAAAACTCATGTCTGAAACTTCTCACAAAGTTCTCGCTTTAGATGTTTACAACGACAAAATCAAACACCTTTTAGAACCTGAATCGCTTCCTTGGAATGGTCGCATTCACTTTCATCGTCTTAATATCAAGAACGATTCAAGGCTTGAAGGTCTCATCAAGATGGCAGATCTGGTTATAAATCTGGCTGCAATTTGTACTCCTGCTGATTACAATACACGTCCTCTTGATACAATTTATAGCAATTTCATTGATGCACTTCCTGTGGTGAAGTATTGTTCTGAAACCAATAAGAGGTTGATTCATTTCTCTACTTGTGAAGTGTATGGGAAAACTATTGGTAGTTATCTTCCTAAAGATAGTCCTCTTCGTCAGGACCCTGCATACTATATGCTTAAAGAAGATGTGTCTCCATGCATTTTCGGTTCAATCGAAAAGCAGAGATGGTCATATGCATGTGCAAAGCAGTTGATTGAGAGGCTGGTTTATGCTGAGGGTGCTGAAAACGGCTTGGAGTTCACAATTGTGAGGCCCTTTAATTGGATCGGACCTAGAATGGACTTCATTCCCGGTATTGACGGACCAAGTGAGGGTGTTCCCCGTGTTCTTGCATGCTTCAGCAATAATCTTCTTAGAGGAGAGCCCCTCAAGCTTGTGGATGGTGGTGAATCCCAGAGAACATTTGTTTACATCAAAGATGCTATTGAAGCTGTCTTATTGATGATTGAAAACCCTGCCAGAGCCAATGGCCATATTTTTAATGTGGGTAACCCAAACAATGAGGTTACAGTTAGGCAGCTCGCTGAAATGATGATCCAGGTCTATTCAAAGGTTAGTGGAACTCAACCACCTGAAACACCTACGATTGATGTGAGCTCGAAAGAATTTTATGGTGAGGGATATGATGATAGTGACAAGAGAATTCCTGACATGACCATAATCAACAAGCAGCTCGAATGGAATCCAAAGACTTCACTTTGGGACCTGCTTGAATCCACACTTACCTATCAGCACAGGACATACGCCGAAGCCATTAAGAAAGTCATTGCTCAACCAATTGCAAGTTAA 1173 0.4237 MASPSSTRIDLDGNPIKPLTICMIGAGGFIGSHLCEKLMSETSHKVLALDVYNDKIKHLLEPESLPWNGRIHFHRLNIKNDSRLEGLIKMADLVINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSETNKRLIHFSTCEVYGKTIGSYLPKDSPLRQDPAYYMLKEDVSPCIFGSIEKQRWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRGEPLKLVDGGESQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMIQVYSKVSGTQPPETPTIDVSSKEFYGEGYDDSDKRIPDMTIINKQLEWNPKTSLWDLLESTLTYQHRTYAEAIKKVIAQPIAS* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1633 390 PANTHER - 7 389 - -
Mtr4g1633 390 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 7 389 - -
Mtr4g1633 390 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 20 373 IPR036291 -
Mtr4g1633 390 CDD Arna_like_SDR_e 20 375 IPR045869 GO:0016831
Mtr4g1633 390 Pfam NAD dependent epimerase/dehydratase family 21 291 IPR001509 -
Mtr4g1633 390 Gene3D - 19 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1633 Mtr-Chr4 28521870 28524980 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1633 19 385 Miscellaneous Gene Families AT1G02000 20.000 3.22e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1633 K12449 - gmx:100792879 738.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1633 4 28521870 28524980 Mtr4g1633 4 28521870 28524980 ECH
Mtr2g3331 2 47373356 47378194 Mtr4g1633 4 28521870 28524980 PCT