Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr4g1853 ATGGCAGGGAATTCTTCTAATGGAGATCAATCAACAGCTAAGCAGCCTCCTTTGCCATCTCCCCTGCGTTTTTCCAAATTCTTTCAGTCTAACATGAGAATCTTGGTTACTGGAGGAGCTGGTTTCATTGGTTCTCACCTTGTCGATAGATTGATGGAAAATGAAAAGAATGAGGTCATTGTTGCTGATAACTTCTTCACTGGATCAAAGGACAACCTCAAAAAATGGATTGGTCATCCAAGATTTGAACTTATCCGTCATGATGTCACTGAGACTTTGATGATTGAGGTGGATCAGATCTACCATCTCGCATGCCCCGCATCTCCTATTTTCTACAAATATAATCCTGTGAAGACAATAAAGACAAATGTGATTGGCACTCTGAACATGCTTGGGCTTGCAAAGAGAGTTGGAGCAAGGATTTTGCTTACATCAACTTCAGAGGTATATGGGGATCCTCTTGAGCATCCCCAACCTGAAAGCTATTGGGGCAATGTTAACCCTATTGGAGTTCGTAGCTGCTATGACGAAGGGAAACGTGTGGCTGAGACTTTGATGTTTGATTATCATAGGCAACATGGGATAGAAATACGTGTTGCAAGAATCTTTAACACATATGGGCCGCGCATGAATATCGATGATGGACGTGTTGTCAGCAACTTCATTGCTCAAGCACTGCGTGGTGAATCCTTGACTGTCCAAGCACCAGGAACGCAAACTCGCAGTTTCTGCTATGTCTCTGACCTGGTTGATGGCCTTATCCGTCTCATGGGAGGATCAGACACTGGTCCAATCAATCTTGGCAACCCAGGTGAATTCACGATGACGGAACTTGCTGAGACAGTGAAGGAGCTTATTAATCCAAATGTGGAGATAAAGATAGTGGAGAATACTCCTGATGATCCAAGACAGAGAAAACCAGACATAACCAAAGCAAAGGAATTGCTTGGCTGGGAACCAAAGGTCAAGCTGAGCGAAGGTCTTCCTCTCATGGAAGGAGATTTCCGTTTGAGGCTTGGAGTTGACAAGAAAGAATAA 1038 0.4383 MAGNSSNGDQSTAKQPPLPSPLRFSKFFQSNMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNFFTGSKDNLKKWIGHPRFELIRHDVTETLMIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRVARIFNTYGPRMNIDDGRVVSNFIAQALRGESLTVQAPGTQTRSFCYVSDLVDGLIRLMGGSDTGPINLGNPGEFTMTELAETVKELINPNVEIKIVENTPDDPRQRKPDITKAKELLGWEPKVKLSEGLPLMEGDFRLRLGVDKKE* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr4g1853 345 CDD UGD_SDR_e 32 336 - -
Mtr4g1853 345 Pfam GDP-mannose 4,6 dehydratase 35 329 IPR016040 -
Mtr4g1853 345 MobiDBLite consensus disorder prediction 1 20 - -
Mtr4g1853 345 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 1 345 IPR044516 GO:0042732|GO:0048040|GO:0070403
Mtr4g1853 345 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 27 333 IPR036291 -
Mtr4g1853 345 Gene3D - 155 338 - -
Mtr4g1853 345 Gene3D - 29 154 - -
Mtr4g1853 345 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 1 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr4g1853 Mtr-Chr4 31637630 31642141 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr4g1853 34 328 Miscellaneous Gene Families AT4G00110 24.848 4.49e-18 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr4g1853 K08678 - gmx:100790835 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g1853 4 31637630 31642141 Mtr4g1853 4 31637630 31642141 ECH
Mtr2g3331 2 47373356 47378194 Mtr4g1853 4 31637630 31642141 ECH
Mtr4g1853 4 31637630 31642141 Mtr2g3331 2 47373356 47378194 PCT