Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0231 ATGGCGGAAACTAGTTTATCGTTGATACTTCCGAACATGAAGAAGAAAACTACGCTATTTTCATCATCCTCTTCTTCTTCTTCTCCTCTTCCCATTTTTTCTACCAAGAGTTTGCTCTACGATAAGCTTCCTTCGGAACCGTTAAGGCTTTCTGTTCTCAAATTAGACGGAACTTCTTTTGATGTTCATGTTTCGAAGAATGCCACTATTGCGGAGCTTAAGGATGCTGTGGAAGGTGTTTTTAGTTACATGCCTCAGCATGGTCCTGCCAAAATTTCATGGCCACATGTTTGGGGGCAGTTTTGCTTATGTTATGATGGACAGAAGCTAGTTACAGAGAAGGATTACCTTAAAAATTATGGCGTCAAGGACAGTGACCAGCTCCATTTCATTCGCCATGCATCAAACAATTGCGGTGCTCGAAGAAAGCGGTCAAAGAAAAGAGTTTTCCATTTGAAACAACACAGGAGGTTGTCGCAAGCAAATTACTGCAAACAGAAAGAAAACTGTGATGCTGATGAGGACGACGATGATGGTGACATTTCTTCTGATGAGGAAGCCTTGGAGAATGCAGAGACCAAGCACCACATTGAAGAAGTGCATGTTAGAAAGAACAAGATCACTGGCTTTGTGGGAGAGCTGTTATCATACACACCACTGGCAGTTGTGAGAAAAACTAGAGCTCAAAACCAGATCTTCCCGTCAACAATTTCCAGGTGTTTGATTGGTGGTCTTAGAAAGATCAAAAGGATTGTATGTTTTGGCAGGAGGCAGCAGTATCCTACATGGAGACAGTACTGA 801 0.4232 MAETSLSLILPNMKKKTTLFSSSSSSSSPLPIFSTKSLLYDKLPSEPLRLSVLKLDGTSFDVHVSKNATIAELKDAVEGVFSYMPQHGPAKISWPHVWGQFCLCYDGQKLVTEKDYLKNYGVKDSDQLHFIRHASNNCGARRKRSKKRVFHLKQHRRLSQANYCKQKENCDADEDDDDGDISSDEEALENAETKHHIEEVHVRKNKITGFVGELLSYTPLAVVRKTRAQNQIFPSTISRCLIGGLRKIKRIVCFGRRQQYPTWRQY* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0231 266 Pfam Ubiquitin-like domain 48 133 IPR040610 -
Mtr1g0231 266 PANTHER - 2 262 - -
Mtr1g0231 266 Gene3D - 43 141 - -
Mtr1g0231 266 CDD Ubl_SNRNP25 48 133 IPR040610 -
Mtr1g0231 266 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN 2 262 IPR039690 GO:0000398|GO:0005689
Mtr1g0231 266 SUPERFAMILY Ubiquitin-like 43 139 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0231 Mtr-Chr1 2590548 2594773 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0231 - - gmx:100819176 314.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0231 1 2590548 2594773 Mtr1g0231 1 2590548 2594773 ECH
Mtr3g3899 3 52825077 52827590 Mtr1g0231 1 2590548 2594773 ECH
Mtr1g0231 1 2590548 2594773 Mtr3g3898 3 52823263 52824189 PCT