Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3898 ATGGCCTCAATGATCATGGCTTCTTCAAAACCCATAATCCGAGTTCCAACCAATTCCCTTCCCTCCACCCCCAAACTCCCCTCCCTCCAAACCATCACCCCAAACCTCAAACTCCAACTCTCAAAACTCAAATCCATGACCCTAGCAGCAACTTCCCTCTCTTTCGTCTTCGCACCACCTTCCCTCGCTTTCGAAAAAGCCGCACTCTTCGATTTCAACCTCACTCTCCCAATCATAGTCGTTGAATTTCTCTTCCTCATGTTCGCTCTCGATAAACTCTACTTCACCCCTCTCGGAACCTTCATGGACAACCGTGACGCCGAGATCAGAGGCAAACTCAACAGCGTCACCAACACATCCGAAGAAGTGAAGGAGTTGGAAGAACAAGCCAATGCAGTTTTGAGAGCTGCGCGTGCTGAAATTGCGGTGGCGCTGAATCAGATGAAGAAAGAGACTCAAGCTGAAGTGGAAGAGAAGATTGCGGAAGGGAGGAAGAAGGTTGATGCTGAACTGCAAGAAGCGCTTGCGAATTTGGAAAAGCAAAAGGAAGAAACTGTTAAAGCTCTTGATTCTCAGATTGCTGCTCTTAGCCAGGATATTGTTAATAAGGTTCTTCCTGTTTCTCGTTGA 630 0.4746 MASMIMASSKPIIRVPTNSLPSTPKLPSLQTITPNLKLQLSKLKSMTLAATSLSFVFAPPSLAFEKAALFDFNLTLPIIVVEFLFLMFALDKLYFTPLGTFMDNRDAEIRGKLNSVTNTSEEVKELEEQANAVLRAARAEIAVALNQMKKETQAEVEEKIAEGRKKVDAELQEALANLEKQKEETVKALDSQIAALSQDIVNKVLPVSR* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3898 209 Hamap ATP synthase subunit b [atpF]. 70 207 IPR002146 GO:0015078|GO:0015986|GO:0045263
Mtr3g3898 209 Coils Coil 109 162 - -
Mtr3g3898 209 Coils Coil 164 199 - -
Mtr3g3898 209 CDD ATP-synt_Fo_b 75 205 - -
Mtr3g3898 209 PANTHER ATP SYNTHASE SUBUNIT B', CHLOROPLASTIC 1 207 - -
Mtr3g3898 209 Hamap ATP synthase subunit b' [atpF2]. 69 206 IPR034679 GO:0015078|GO:0015986|GO:0045263
Mtr3g3898 209 Pfam ATP synthase B/B' CF(0) 76 205 IPR002146 GO:0015078|GO:0015986|GO:0045263
Mtr3g3898 209 PANTHER ATP SYNTHASE SUBUNIT B', CHLOROPLASTIC 1 207 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3898 K02109 - gmx:100527009 267.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3898 3 52823263 52824189 Mtr3g3898 3 52823263 52824189 ECH
Mtr1g0231 1 2590548 2594773 Mtr3g3898 3 52823263 52824189 PCT