Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi12g2083 ATGGCTCTGTTTTCCTACTTTCCGCATTCTATCCAATTCCTCTGCAGTAGTTTCTTCATTCTTTTTCTCGTTTTCAAAGGAACTTCGGGCGCAACATTTACGTTTGTGAACAAGTGTGATTACACAGTATGGCCTGGAATCCTAGGAAAACCCGACATCGGAAGTACAGGATTTGAGCTGGCAAGAGGTAGTTCTAGAAGCTTCCAGGCCCCTTCGGGTTGGTCCGGAAGATTCTGGGCCCGAACCGGCTGCAAATTCGACGACTCCGGCCACGGAACTTGCGCCACCGGCGACTGCGGCTCCGGGCAAATCCTCTGCTCCGGCGCCGGCGCCACCCCTCCGGCGACCCTCGCCGAGTTCACCCTCGGCTCCTCCGGCTCCCAGGACTACTACGACGTCAGCCTCGTCGACGGCTTCAACCTTCCGATGACCGTCGAAGCCACCGGCGGCTCCGGCTCCTGCTCCAGCACCGGCTGCGTCGCCGATCTCAACCGCCGGTGTCCGTCGGAGCTGAGGGCTGAGGGCGGCGGCGCGTGTAACAGCGCGTGCGGCGCATTCGGAAAGCCGGAGTATTGCTGTAACGGCGAGTACGGATCGCCGTCCACGTGTAAGCCGTCGATGTACTCTGTGATGTTCAAGTCGGCGTGCCCGAAATCGTATAGTTATGCCTACGACGATGCCACCAGTACCTTCACTTGTACCGCCGCCGATTATACCGTCACCTTCTGTCCTTCTTCTTCCCCAAGCCTTAAGTCGACGGGTTCGTCGCCGACGGGGACAGATTCGTCTTCTTCTTCGGGATCATCGGTGGAAGAAGGTGCACTAGCTTCGACTTCATGGCTGGCTGATATGGCAACAGGGGATACTACGAGGAATTATGATCAGGGAGCTTTAAAATCTGCGTCTTTTGTGGTTCTTACCGTCATTCTTTCCTTTTTAGTGTCGTAG 948 0.5643 MALFSYFPHSIQFLCSSFFILFLVFKGTSGATFTFVNKCDYTVWPGILGKPDIGSTGFELARGSSRSFQAPSGWSGRFWARTGCKFDDSGHGTCATGDCGSGQILCSGAGATPPATLAEFTLGSSGSQDYYDVSLVDGFNLPMTVEATGGSGSCSSTGCVADLNRRCPSELRAEGGGACNSACGAFGKPEYCCNGEYGSPSTCKPSMYSVMFKSACPKSYSYAYDDATSTFTCTAADYTVTFCPSSSPSLKSTGSSPTGTDSSSSSGSSVEEGALASTSWLADMATGDTTRNYDQGALKSASFVVLTVILSFLVS 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi12g2083 315 ProSitePatterns Thaumatin family signature. 90 106 IPR017949 -
Mibi12g2083 315 PRINTS Pathogenesis-related protein signature 234 243 IPR001938 -
Mibi12g2083 315 PRINTS Pathogenesis-related protein signature 129 145 IPR001938 -
Mibi12g2083 315 PRINTS Pathogenesis-related protein signature 56 65 IPR001938 -
Mibi12g2083 315 PRINTS Pathogenesis-related protein signature 77 88 IPR001938 -
Mibi12g2083 315 PRINTS Pathogenesis-related protein signature 32 44 IPR001938 -
Mibi12g2083 315 ProSiteProfiles Thaumatin family profile. 30 244 IPR001938 -
Mibi12g2083 315 PANTHER OS03G0233200 PROTEIN 20 244 IPR001938 -
Mibi12g2083 315 SMART tha2 33 244 IPR001938 -
Mibi12g2083 315 Pfam Thaumatin family 37 244 IPR001938 -
Mibi12g2083 315 Gene3D Thaumatin 31 244 IPR037176 -
Mibi12g2083 315 MobiDBLite consensus disorder prediction 245 270 - -
Mibi12g2083 315 CDD TLP-PA 32 243 - -
Mibi12g2083 315 FunFam THAUMATIN-LIKE PROTEIN 1 31 244 - -
Mibi12g2083 315 PIRSF PR5 4 285 IPR001938 -
Mibi12g2083 315 SUPERFAMILY Osmotin, thaumatin-like protein 31 245 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi12g2083 Mibi-ChrMibi12 37326434 37327733 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi12g2083 7 266 Receptor kinase-like Gene Family AT5G38280 45.588 1.76e-78 250
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi12g2083 12 37326434 37327733 Mibi12g2083 12 37326434 37327733 ECH
Mibi10g0692 10 17119707 17122206 Mibi12g2083 12 37326434 37327733 ECH
Mibi01g1775 01 26016309 26019512 Mibi12g2083 12 37326434 37327733 ECH