Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi10g0692 ATGGCTCTGTTCTCTGATCACCAACGTTCTTCAGCATTAGTCCTCATTTTCATCCTTTTTTCTGTTCTCAAAGAATGCTCTGTTTTCTTTTTTTTTTTTCTTTTTTTTAATATGTGTATATATACAGGAGTTTCAGGGGCTACATTCACGTTTGTGAACAAGTGTGATCACACGGTATGGCCGGGTGTACTGGGAAAACCAGACCTAGGAACCACAGGATTCGAGCTCACCAAGGGAAATTCTAGAACCTTCCAAGCACCAACCGGATGGTCCGGTAGATTCTGGGCAAGAACAAACTGTAAATTCGACGATTCCGGTCACGGAACCTGCGATACCGGTGACTGTGGATCCAACAGTATCGCCTGTAACGGTAACGGAGCTTCACCACCGGCAACACTAGCAGAATTCACGCTTGACCCATCAGGTTCAAAAGATTTCTATGACGTCAGCCTTGTAGATGGTTATAATCTTCCGATGATGGTTGAAGCAAATGGAGGGTCAGGATCTTGTGAGACAACAGGTTGTGCGGCGGATCTTGTCCGTCGATGTCCTTCGGAGTTGAAGGCTGATGGTGGTGACGCGTGTAAGAGTGCTTGTGACGCGTTTGGGTCGCCGGAATATTGCTGCAACGGAGAATTTAGTTCGCCGGCTACGTGTAAGCCGTCGATGTATTCGCAGATTTTTAAATCGGTGTGTCCTAAAGCGTATAGTTATGCTTATGATGACTCGACTAGCACCTTTACTTGTTCTGGAGCTGATTATACTGTCACATTTTGTCCTTCTTCACCAAGTCTAAAATCGGCATCAATAGGGGTTGACGCACAACAATCAGTGGAACAAGCAGCCGCGGCAACTTCTTCTTGGATCGCAAATTTGGCAACGGGCGATTCCACTTCAATCCACCCTTCAATCTCTCCATTTCTTCTTCTGCCTCTTACTCTCGTTGTTTCCTTCATTTAA 960 0.4573 MALFSDHQRSSALVLIFILFSVLKECSVFFFFFLFFNMCIYTGVSGATFTFVNKCDHTVWPGVLGKPDLGTTGFELTKGNSRTFQAPTGWSGRFWARTNCKFDDSGHGTCDTGDCGSNSIACNGNGASPPATLAEFTLDPSGSKDFYDVSLVDGYNLPMMVEANGGSGSCETTGCAADLVRRCPSELKADGGDACKSACDAFGSPEYCCNGEFSSPATCKPSMYSQIFKSVCPKAYSYAYDDSTSTFTCSGADYTVTFCPSSPSLKSASIGVDAQQSVEQAAAATSSWIANLATGDSTSIHPSISPFLLLPLTLVVSFI 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi10g0692 319 PIRSF PR5 5 303 IPR001938 -
Mibi10g0692 319 PRINTS Pathogenesis-related protein signature 72 81 IPR001938 -
Mibi10g0692 319 PRINTS Pathogenesis-related protein signature 145 161 IPR001938 -
Mibi10g0692 319 PRINTS Pathogenesis-related protein signature 250 259 IPR001938 -
Mibi10g0692 319 PRINTS Pathogenesis-related protein signature 48 60 IPR001938 -
Mibi10g0692 319 PRINTS Pathogenesis-related protein signature 93 104 IPR001938 -
Mibi10g0692 319 SUPERFAMILY Osmotin, thaumatin-like protein 47 261 IPR037176 -
Mibi10g0692 319 FunFam THAUMATIN-LIKE PROTEIN 1 47 260 - -
Mibi10g0692 319 ProSiteProfiles Thaumatin family profile. 46 260 IPR001938 -
Mibi10g0692 319 SMART tha2 49 260 IPR001938 -
Mibi10g0692 319 Pfam Thaumatin family 53 260 IPR001938 -
Mibi10g0692 319 Gene3D Thaumatin 47 260 IPR037176 -
Mibi10g0692 319 CDD TLP-PA 48 259 - -
Mibi10g0692 319 PANTHER OS03G0233200 PROTEIN 33 260 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi10g0692 Mibi-ChrMibi10 17119707 17122206 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi10g0692 31 300 Receptor kinase-like Gene Family AT5G38280 44.326 7.49e-75 241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi10g0692 10 17119707 17122206 Mibi10g0692 10 17119707 17122206 ECH
Mibi10g0692 10 17119707 17122206 Mibi12g2083 12 37326434 37327733 ECH
Mibi01g1775 01 26016309 26019512 Mibi10g0692 10 17119707 17122206 ECH