Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi01g1775 ATGGGACGCTTCCTTCGTTTCTTCATCATCCTCATCTTCCTTCCACTATCTTCCCTATCCGAGGTTCAATCAACATCCTTCAAGATCATCAACAAGTGCCACCACACAATCTGGCCTGGATTACTCTCCGGCGCCACCTCACCACCACTTCCGACCACCGGATTCGCCCTTCAATCCGGAAAATCAAAAACTCTAAGCATCCCTAAATCCTGGTCGGGTCGGATCTGGGCCCGGACCCTCTGCGGCCAAGACTCCGCCGGAAAATTCTCATGCCTCACCGCCGACTGCGGCGGCGGACAGGTCCACTGCGACGGCGGAGCGAAACCTCCGGCGACGTTGGCCGAGTTCACTCTCAACGGCGCCGACGGCTTAGATTTTTACGACGTGAGTTTGGTCGACGGTTATAATCTTCCGATGTTGATTGTGGCGAAGGGCGGAGATCGCGGTGGTTGTGGGGCCACCGGGTGTTTGATCGATTTGAATGGAGGTTGTCCGGTGGATCTTAGGGTGGCGCGTGGGAATGGGACGGGTGAGAGCGTGGCTTGTAGGAGCGCGTGTGAGGCTTTTGGGGATCCGCGATATTGTTGCAGTGAGGCGTATGCTACGCCTGACACGTGTGGTCCGTCGGTGTATTCTGAGTTCTTTAAGCACGCTTGCCCACGCGCGTATAGCTACGCGTATGATGATAAGACTAGCACCTACACGTGTGCTTCGGCTGACTACTTAATCATTTTCTGCCCCTTGCCCTACACCAGCCAGAAGCTGCTGGGAGCACGAAAAGATGGGGCAGCACTTCCTCTTGTAAACAAAACCATGATGTACTTGAAACATTCAGGAGTTTCTTCATCAACAGGTCTGAATCAGATGCAGATTATGGCTTACATTGCCTCCCTTGCTGCAGCATCTTTCCTGTTTTGCTCTTTGTTTCACCCGTTATGA 939 0.5346 MGRFLRFFIILIFLPLSSLSEVQSTSFKIINKCHHTIWPGLLSGATSPPLPTTGFALQSGKSKTLSIPKSWSGRIWARTLCGQDSAGKFSCLTADCGGGQVHCDGGAKPPATLAEFTLNGADGLDFYDVSLVDGYNLPMLIVAKGGDRGGCGATGCLIDLNGGCPVDLRVARGNGTGESVACRSACEAFGDPRYCCSEAYATPDTCGPSVYSEFFKHACPRAYSYAYDDKTSTYTCASADYLIIFCPLPYTSQKLLGARKDGAALPLVNKTMMYLKHSGVSSSTGLNQMQIMAYIASLAAASFLFCSLFHPL 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi01g1775 312 ProSiteProfiles Thaumatin family profile. 24 247 IPR001938 -
Mibi01g1775 312 SUPERFAMILY Osmotin, thaumatin-like protein 26 247 IPR037176 -
Mibi01g1775 312 CDD TLP-PA 26 246 - -
Mibi01g1775 312 Gene3D Thaumatin 25 247 IPR037176 -
Mibi01g1775 312 Pfam Thaumatin family 31 247 IPR001938 -
Mibi01g1775 312 ProSitePatterns Thaumatin family signature. 87 103 IPR017949 -
Mibi01g1775 312 PRINTS Pathogenesis-related protein signature 237 246 IPR001938 -
Mibi01g1775 312 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Mibi01g1775 312 PRINTS Pathogenesis-related protein signature 87 116 IPR001938 -
Mibi01g1775 312 PRINTS Pathogenesis-related protein signature 26 38 IPR001938 -
Mibi01g1775 312 PRINTS Pathogenesis-related protein signature 74 85 IPR001938 -
Mibi01g1775 312 FunFam THAUMATIN-LIKE PROTEIN 1 25 247 - -
Mibi01g1775 312 SMART tha2 27 247 IPR001938 -
Mibi01g1775 312 PANTHER OS03G0233200 PROTEIN 12 247 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi01g1775 Mibi-ChrMibi01 26016309 26019512 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi01g1775 7 247 Receptor kinase-like Gene Family AT5G38280 47.561 6.25e-80 254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi01g1775 01 26016309 26019512 Mibi01g1775 01 26016309 26019512 ECH
Mibi01g1775 01 26016309 26019512 Mibi10g0692 10 17119707 17122206 ECH
Mibi01g1775 01 26016309 26019512 Mibi12g2083 12 37326434 37327733 ECH