Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g1343 ATGCCTACGGCGGTCGGAGTAGCCAAGCAATGCTTAACACCAGAAGCATCTCACGTTCTCGAAGAAGCCGCCGCCGTCGCGCGCCGCCGTGGCCACCCACAGACCACGTCACTGCATGCCATCTCCGCCTTGCTTTCCTTACCATCGTCTTCCTTACGTGACGCCTGTGCTCGTGCCCGAAACTCTGCCTACGTTCCTCGCCTTCAATTCAAAGCACTTGAGCTTTGTTTGAGTGTATCACTCGATCGTATTACTTCTACTCACCTCGTTGATGACCCACCAGTCTCTAACTCTCTCATGGCCGCAATTAAACGATCTCAGGCTAGTCAGAGAAGGCAGCCTGATAATTTCAACATTTACCAGCAGATTTCGAATCAGCAGCCTACTTCGGTTTCGGCTGTTAAGGTTGAACTTCAGCAGTTGATATTGTCGATTCTTGATGACCCGGTTGTGAGTAGGGTGTTCGGTGATGCGGGTTTTCGGAATTCTGAGATTAAGCTTGCGATTCTTCGCCCTCTTCCTCAGTTACTCAGGTATTCTCGGCCTAGAGTTGCTCCTGTGTTTCTATGTAATTTGACTGAGCATCCTGACCCGGGTCGTCGGAGCTTTAGTTTTCCGTTTGCTGGGTCTTTTGTTAGTTGTGATGGCGGTTCTGAGAATTATAAGAGGATTGGGGATGTGCTTTGTAGGAGTAGAGGGAGGAATCCCCTGCTTCTGGGTGTATGTGCTGATGATGCTCTACGTAGTTTCATAGATGATGTTAATAAACAAAAGGATGGTGTTTTGCCTGTGGAGTTATCTGGATTGCGTGTGGTATGCATAGGGGAGGATGTTTCTAAGTTTGTCTTGGGGGATTGTGAAAATGAGGCTTTCAGTTTGAGGCTTAAGGAGATTGGTGAAACGATAGAGCAGGGAGTGGGACCTGGTTTGGTGGTGAATTTTGGGGACTTGAAGTGTTTGATTGATGAGAATGCATCGAGTGAGGCAGTGAATTATGTTGTTGCTGAATTGGCGAAGTTGTTGGGGCTTAATTATGGCAAGTTTTGGTTGATGGGAGCTGCTGCAAGCTATGAGGGCTATCTGAAATTTATGGGAAGGTTTCCTTCTATTGAGAAGGATTGGGACTTGCAGCTTCTGCCCATCACATCTAGTAGGCCTCAGGATGAATCAAATCAGAGGCCTAGGTACAGCTTAATGGACTCATTTGTCCCATTTGGTGGCTTGTTTTCTTCATCTTCTGATTTGAAAGGTCCACTACATGGCTCATATTATTGTGTTCCCCACTGCCTTCAATGTGGTGAAAGTTGTGTTCAAGAAGTGCTTCCAGCTTCAAATGAGAGGCTCTCTGCTTTGGCTGCTGATCCTTATCAATCTGATTTACCTCCATGGTTGCGTGCTGCTGACCTTGACATAACAAAAGGGTTGAATGATAAGACAAAAGAAGACACTGTTCGGCTGGATGCTAGTGAATATGAGCCTATCAAGAACTTGGACAAGACATGCCAGCATCTGCATAATAGTCAGCAATCATCTGAAGCAATTCCTTGTCGAATTGTCGTGAGTTCCCAATGCTCTGATGGTGAAAAGGAAGACGTTGTCGTTGACGATCACTGTAACAAAATTTCAGATGCATCGGCTAGTGTGGACATCGATCTCAATTCAAGTGTGCCTATTTCAGAGGAGATGATTTCTACACCACATTCAGAGGAGAAACATATTTCTAAAGCCATAGAGATGTTCCAAAAAGCAAAAGATCTTGAGTCAGGTGACCTAAGATCATGTAACATGTCCAATTCAAGCGTGTGTGATGGCAGCCAATTGTCTCCCTCATCTGTGACTTCTGTAACCACAGATCTAGGCATAGGAATCTGCATTTCTCCTGCAAGCAACAAATCTAAGAAACCGGCTATGGGGGTTCCAAAGGAAATTGGGAGTCCCCTCTCTTCAAACCATAATTTAGTTAACAAGGATGCCTTTAAGTATCCAGCCCAGTCTTCATCCTGCTTAAGTTCTGACCATTCTGGACAGTATGATATAAGAAATCCAAAAATTCTTTTTGAAGCTCTTGCCAAAAAGGTTACCTGGCAGGATGAAGCCTTACAGAGCATTGTAAAAACAATATCCTACTGTCAGACAAGCAGGAGCAAATGCATGGGATCAAGTCAACGGGAGGGTGTATGGATGAATTTTGTAGGAACTGATAGGATTGGTAAGAAGAAAATTGCTGTTTCTCTGGCTGAGATTTTGTATGGAAGCCAGGAAAGCTTTATTTCTGTGGACCTAAATTGTGAGGAAGTAAATGGACACAATGTGAAATTTAGAGGAAAGACTATTCTTGATGTTTTAGTTGGGGGATTGTGCAAAAATCCATTGTCTGTAGTTTTCCTTGACAATGTTGACAAGGCTGATACAATGGTTCAAAGTAGTTTATCCCAAGCCGTCAAGACTGGAAAAATTATAGACTCGTGTGGAAGAGAAGTTGGAGTAAACAATGCAATAATTGTGACATCTTTCTCCGTTCAAGAAGACAATTGGAATTGCACACCAAAGACAGAGTTCTCCAGCTATTCTGAGGAAAGAGTATTAAGGACGAAAGGGATACCGATCAAGATAAAAGTTGAACATGTAATTGGAGACATCAGAAGTCCAAGCGTTGCCGTGCTTAAATGTTCAACAGAGGGCATTCCCAAACCAATCCTTTTAAATAAAAGAAAGCTGAGTTGCAACAATGCCCTTAGTGGTCATCACAAAAGCTCAGAAATGGCTAAAAGGGCTCACAAAATTTCAAATTGTCTTCTAGATTTGAACGTCCCAGCAGAAGAGAACGAGCTGCAGTTCATAGATGACGAAAACCCTGACGATGTCTCAACTGCAACACAAAAACCCTGGTTGCAAGAATTGTATGATCAGGTTGATGGGACAATCATCCTGAAACCATATGATTTTGGCACACTTGCAAATAGAGTGTTAAAAATTATCAGAAGGAGCTTTTACAAGATTCTTGGATCCAAGTGCTCACTACAGATAGAGTCAGAAGTCATGGAACAGTTACTTGCAGCTGCATATGTCTCGGAAGGGGACATGGAAGTGGAGGATTGGGTGGAGGAAGTTCTAAGTGGAGGATTTACAGAGATACAGAGAAGGTATAACCTCTCTGCTTGTTCTATTGTGAAACTTGCTACATGTCAGGAGCAAGCTCCTGGTGTGTACCTTCTTCCCCCAAGGATAATAGTGGACTGA 3240 0.437 MPTAVGVAKQCLTPEASHVLEEAAAVARRRGHPQTTSLHAISALLSLPSSSLRDACARARNSAYVPRLQFKALELCLSVSLDRITSTHLVDDPPVSNSLMAAIKRSQASQRRQPDNFNIYQQISNQQPTSVSAVKVELQQLILSILDDPVVSRVFGDAGFRNSEIKLAILRPLPQLLRYSRPRVAPVFLCNLTEHPDPGRRSFSFPFAGSFVSCDGGSENYKRIGDVLCRSRGRNPLLLGVCADDALRSFIDDVNKQKDGVLPVELSGLRVVCIGEDVSKFVLGDCENEAFSLRLKEIGETIEQGVGPGLVVNFGDLKCLIDENASSEAVNYVVAELAKLLGLNYGKFWLMGAAASYEGYLKFMGRFPSIEKDWDLQLLPITSSRPQDESNQRPRYSLMDSFVPFGGLFSSSSDLKGPLHGSYYCVPHCLQCGESCVQEVLPASNERLSALAADPYQSDLPPWLRAADLDITKGLNDKTKEDTVRLDASEYEPIKNLDKTCQHLHNSQQSSEAIPCRIVVSSQCSDGEKEDVVVDDHCNKISDASASVDIDLNSSVPISEEMISTPHSEEKHISKAIEMFQKAKDLESGDLRSCNMSNSSVCDGSQLSPSSVTSVTTDLGIGICISPASNKSKKPAMGVPKEIGSPLSSNHNLVNKDAFKYPAQSSSCLSSDHSGQYDIRNPKILFEALAKKVTWQDEALQSIVKTISYCQTSRSKCMGSSQREGVWMNFVGTDRIGKKKIAVSLAEILYGSQESFISVDLNCEEVNGHNVKFRGKTILDVLVGGLCKNPLSVVFLDNVDKADTMVQSSLSQAVKTGKIIDSCGREVGVNNAIIVTSFSVQEDNWNCTPKTEFSSYSEERVLRTKGIPIKIKVEHVIGDIRSPSVAVLKCSTEGIPKPILLNKRKLSCNNALSGHHKSSEMAKRAHKISNCLLDLNVPAEENELQFIDDENPDDVSTATQKPWLQELYDQVDGTIILKPYDFGTLANRVLKIIRRSFYKILGSKCSLQIESEVMEQLLAAAYVSEGDMEVEDWVEEVLSGGFTEIQRRYNLSACSIVKLATCQEQAPGVYLLPPRIIVD 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g1343 1079 Gene3D - 10 171 IPR036628 -
Mibi08g1343 1079 Gene3D - 660 875 IPR027417 -
Mibi08g1343 1079 ProSiteProfiles Clp repeat (R) domain profile. 7 175 IPR004176 -
Mibi08g1343 1079 SUPERFAMILY Double Clp-N motif 12 117 IPR036628 -
Mibi08g1343 1079 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 681 1023 IPR027417 -
Mibi08g1343 1079 Coils Coil 1078 1079 - -
Mibi08g1343 1079 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 4 1045 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g1343 Mibi-ChrMibi08 29467423 29471963 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g1343 08 29467423 29471963 Mibi08g1343 08 29467423 29471963 CCT
Mibi08g1343 08 29467423 29471963 Mibi08g1343 08 29467423 29471963 ECH
Mibi06g2055 06 41060169 41063365 Mibi08g1343 08 29467423 29471963 ECH
Mibi05g1449 05 17189298 17194201 Mibi08g1343 08 29467423 29471963 ECH
Mibi08g0644 08 12180430 12184579 Mibi08g1343 08 29467423 29471963 ECH
Mibi08g1343 08 29467423 29471963 Mibi05g1449 05 17189298 17194201 ECH
Mibi08g1343 08 29467423 29471963 Mibi08g0644 08 12180430 12184579 ECH