Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g0644 ATGCCGACGCCGGTCAACGCAGCTAGGCAATGTTTGACCGAGGAGGCAGCGCGTGCACTCGACGACGCGGTGGCGGTAGCGCGTAGGAGAAGCCACGCGCAGACAACCTCCCTCCACGCCGTATCAGCCTTACTCGCCTTACCATCCTCAAAGCTCCGTGAGGCTTGCACACGCGCCGGTAGTTCATGCTACGCGCCGCGTCTACAGTTAAAAGCTCTAGAACTTTCCATAGGCGTTTCACTAGACCGGTCTCCTACTTCGAAAAACCTCGAGGAAGAACCTCCTGTTTCGAATTCCCTCATGGCTGCTATTAAAAGGTCTCAAGCTAATCAAAGAAGGCATCCAGAGAGCTTTCATTTGTTTCAGATGCATAATTTGCAGAATCAGCCGATGCCTAATACGACGACGGCGTTTTTCAAAGTTGAGCTGAAACATTTTGTTTTGTCGATTCTTGATGATCCTATTGTGAGTAGGGTTTTTGGTGATGCTGGGTTTAGGAGTTGTGATGTGAAGTTGTATTTGCTTTCTCCGCCGCCGGTGATGACGTCATCTTCCTCGCCGTTTTCTCGGTGCCCGCCTATTTTTTTGTGTAATTTGCCTGGTTCTGAGAGTTCTGGTTTTAGTTTTAAGTTTCCTTTTATGGGTAATTCTGGGAATGAGGGTTTGGATGGGAATTGTAGGAGGATTGGGGAGGTTCTTGTGAGGAAGACAAAGAGAAACCCTTTGTTGATGGGAAGTTATGCGAAAAGTACTCTTAAGAGTTTTGTAGAATCTGTAGAGAAATGTAGAGAGGGGATTTTGCCAGCTGGAATTACTGGGTTGAGTGTATTTAGCATTGAGGAGGAGATTTCTGAGGTTCTTGGTGAAGGTGGGAGTGAAGAGAAGATGGGTTTGAAATTTAAGGAACTGAGTTGTTCATTGGAACAATGCTCTGGTCCAGGTATTGCCGTGAATTTCGGAGAGATTGATGTGCTTGTGCGCCACGGTGGCGGTGGCGACGGCGAGCCTAGGGAGGCTGCCGGATTTGTTGTTTCAGAATTGACAAGGTTGTTGAAGGTTCATGGTGAGAAAATTTGGGTGGTTGGGGTTGCTGGGGACTCAGTTGTGTATTCCAAGTTTGTAGCTTTGTTTCCAAATATAGAAAAGGATTGGGATTTATATCTATTGACTATTACATCTACCACCCCTTCATTGGGAGGGGTCTACCCTAAGTCCAGCTTGATGGGGTCCTTTGTTCCTTTTGGTGGGTTTTTCTCTTCACCTTCAGAATTAAAAAGCCCGCTAAGCTGTTCAAATCAAAGTTTCAGGCGATGTCACACCTGCGATCAAAAGTATGAACAAGAAGTCTCTGATATTCTAAATGTAGGTCCTGCGACTTTGGCATCTGATTACCCCACAAGCTTGCCTTGGTCACAAAAAGCTAGTGTGGAGTCAGATCAAGGATTGGATGCAGCAAAGAGTAATGAAGAAAATGCAAGTATGGGTGCCAAGATCTTTGGATTGCAAAAGAAATGGAATGATTTTTGTGAAAGACATCATCGAACCTGGGCAAACCCTGAAATTGGTACATCCCAAACAATGCCTAAAGTTCCAGTCCTTGGGGGCTTTCCATTTAGTTCAGGTTTAAAAGAAAGTAGCAGTAAGCATCTATCTTTTAATGAAAGACAGCATTCTCATGATGTTGCTAGTTTTTGTAGTTCATCTGGTCAGGTAGCGAAAGTTTCAGAGATTCGGCACACCGATAAGCTGAGCCCTTTAATTAACCCTTCCTCTAAGGCCATTACTATGCTTGAAGGCAGATCATCATCTTCCCTTACTTCTGTGACCACAGATTTGGGATTGGGGACTATATATACATCAGCTGCTAAGGAGCCAAATACACAGGAACTCCAAAAGCATAAAGAGCACCTTCATGTTCTGAACGATGATAATTTTCACCGAATTTCCGGATCCTCTACATGCTCTGGTCGCAGTTTGGAAGGGAGCTTTAACTCAGTAGACCTAAAGTCTCTTAGTCAAGTTCTCACTCAAAGGGTTGACTGGCAAGATGAGGCCATATCCGCCATCATCCAAACCTTGTCCCTTTGTAAGTCGGGCAGAGGAAAGCATAATGAAAAACATGTTAGAACAGATATATGGTTTGCTTTCCTCGGACCTGATAGATTTGGAAAGAGAATAATTGCTTCCATACTTGCAAAGACAATATTTGGGAACACAGAAAGCCTGATCTCCTTGGATTTGGATTCCCAGGACAAGGCTTACCCATTAGACTCAATAATTGAAAGCCAGGATTCGAATTATTACGACCTCAGGAGGAAAACAGATGTGGGCTTTATTGCTGGGGAGTTGAGTAAGAAACCCCATTCAGTTGTCTTTCTTGAAAATGTAGATAAAGCTGATCTTGTGGTGCAGAATAGTTTGTTTCAGGCACTAAAAAGGGGTAAATTTCCAGACTCATATGGAAGGGAAATCAGCATTCATAATGCAATATTTATTGTAAGCTCAACTGTCTCTAAAGGTAATGGCATTTTTCTTTTGGAAAAGGAGCCTGCAATGTTTACTGAGGAAAGAATCCTTGAAGCCAAAAGATTTCAAATGCAATTACTACCAAGTGATATTTCTGAGGATGCAAAAGTAAGCAGGGGTCCAAATGTTATTGTTACACCTGAAAAAGGGCACTCTAAACAGACATTTCTGAACAAAAGAAAACAGGTTGAAATCAATGACGACAAAGAGAAAGCAGCAAGCAGCAAGATACAGAAACAAGACCAAGAAGCATCAAGATCCTATTTGGATCTAAATATGCCTGTGGAGGAGGTTGAAGATGATGACGACATGGATCATATTGGCAGTGAGAGTAAATCCAAACATGAAGGCTCTCAAGCCTGGTTAAATGATTTCTATGATCAAACTGATGAAAAAGTGGATTTCAAGCCATTAAAATTCGACATGCTTGCCGAGAAAATACTAAAAAGCATCAGCATACAATTTGAAAGGACATTTGGATCACAATTTCTGCTGGAAATTGATTATGAAGTAATGACACAAATACTTGCAGCTGCCTGCTTATCGGACAAGAAAAATGCAGTGGACAATTGGATTGAACTTGTGCTTGGCAAAAGCTTCAATGAAGTTAAACGGAAATATTACTTATCAACTAAGTTTGGAATGAAACTGGTTTCCTGTGAAGGCATTCTGGTGGAAGAACAAGTTCCTGAGCTGTGCCTTCCGGCTAGAATTAACTTGAACTAA 3252 0.4268 MPTPVNAARQCLTEEAARALDDAVAVARRRSHAQTTSLHAVSALLALPSSKLREACTRAGSSCYAPRLQLKALELSIGVSLDRSPTSKNLEEEPPVSNSLMAAIKRSQANQRRHPESFHLFQMHNLQNQPMPNTTTAFFKVELKHFVLSILDDPIVSRVFGDAGFRSCDVKLYLLSPPPVMTSSSSPFSRCPPIFLCNLPGSESSGFSFKFPFMGNSGNEGLDGNCRRIGEVLVRKTKRNPLLMGSYAKSTLKSFVESVEKCREGILPAGITGLSVFSIEEEISEVLGEGGSEEKMGLKFKELSCSLEQCSGPGIAVNFGEIDVLVRHGGGGDGEPREAAGFVVSELTRLLKVHGEKIWVVGVAGDSVVYSKFVALFPNIEKDWDLYLLTITSTTPSLGGVYPKSSLMGSFVPFGGFFSSPSELKSPLSCSNQSFRRCHTCDQKYEQEVSDILNVGPATLASDYPTSLPWSQKASVESDQGLDAAKSNEENASMGAKIFGLQKKWNDFCERHHRTWANPEIGTSQTMPKVPVLGGFPFSSGLKESSSKHLSFNERQHSHDVASFCSSSGQVAKVSEIRHTDKLSPLINPSSKAITMLEGRSSSSLTSVTTDLGLGTIYTSAAKEPNTQELQKHKEHLHVLNDDNFHRISGSSTCSGRSLEGSFNSVDLKSLSQVLTQRVDWQDEAISAIIQTLSLCKSGRGKHNEKHVRTDIWFAFLGPDRFGKRIIASILAKTIFGNTESLISLDLDSQDKAYPLDSIIESQDSNYYDLRRKTDVGFIAGELSKKPHSVVFLENVDKADLVVQNSLFQALKRGKFPDSYGREISIHNAIFIVSSTVSKGNGIFLLEKEPAMFTEERILEAKRFQMQLLPSDISEDAKVSRGPNVIVTPEKGHSKQTFLNKRKQVEINDDKEKAASSKIQKQDQEASRSYLDLNMPVEEVEDDDDMDHIGSESKSKHEGSQAWLNDFYDQTDEKVDFKPLKFDMLAEKILKSISIQFERTFGSQFLLEIDYEVMTQILAAACLSDKKNAVDNWIELVLGKSFNEVKRKYYLSTKFGMKLVSCEGILVEEQVPELCLPARINLN 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g0644 1083 MobiDBLite consensus disorder prediction 909 934 - -
Mibi08g0644 1083 Gene3D - 655 887 IPR027417 -
Mibi08g0644 1083 Gene3D - 10 176 IPR036628 -
Mibi08g0644 1083 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 665 837 IPR027417 -
Mibi08g0644 1083 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 1046 - -
Mibi08g0644 1083 Pfam AAA domain (Cdc48 subfamily) 713 838 IPR003959 GO:0005524|GO:0016887
Mibi08g0644 1083 SUPERFAMILY Double Clp-N motif 12 117 IPR036628 -
Mibi08g0644 1083 ProSiteProfiles Clp repeat (R) domain profile. 8 180 IPR004176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g0644 Mibi-ChrMibi08 12180430 12184579 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g1449 05 17189298 17194201 Mibi08g0644 08 12180430 12184579 CCT
Mibi08g0644 08 12180430 12184579 Mibi08g0644 08 12180430 12184579 ECH
Mibi08g0644 08 12180430 12184579 Mibi08g1343 08 29467423 29471963 ECH
Mibi05g1449 05 17189298 17194201 Mibi08g0644 08 12180430 12184579 ECH
Mibi08g1343 08 29467423 29471963 Mibi08g0644 08 12180430 12184579 ECH
Mibi06g2055 06 41060169 41063365 Mibi08g0644 08 12180430 12184579 ECH